Detailed information    

insolico Bioinformatically predicted

Overview


Name   clpE   Type   Regulator
Locus tag   I6J12_RS06690 Genome accession   NZ_CP068060
Coordinates   1421679..1423958 (+) Length   759 a.a.
NCBI ID   WP_003038586.1    Uniprot ID   I0S608
Organism   Streptococcus anginosus strain FDAARGOS_1155     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 1416679..1428958
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J12_RS06660 (I6J12_06660) - 1416836..1416970 (-) 135 WP_003031275.1 FeoB-associated Cys-rich membrane protein -
  I6J12_RS06665 (I6J12_06665) - 1416979..1417695 (-) 717 Protein_1344 nucleoside recognition domain-containing protein -
  I6J12_RS06670 (I6J12_06670) - 1417754..1419105 (+) 1352 WP_148290568.1 IS3 family transposase -
  I6J12_RS06675 (I6J12_06675) feoB 1419136..1420572 (-) 1437 Protein_1346 ferrous iron transport protein B -
  I6J12_RS06680 (I6J12_06680) - 1420569..1421044 (-) 476 Protein_1347 FeoA family protein -
  I6J12_RS06685 (I6J12_06685) - 1421210..1421440 (-) 231 WP_003023686.1 DUF1797 family protein -
  I6J12_RS06690 (I6J12_06690) clpE 1421679..1423958 (+) 2280 WP_003038586.1 ATP-dependent Clp protease ATP-binding subunit Regulator
  I6J12_RS06695 (I6J12_06695) - 1424002..1424163 (-) 162 Protein_1350 GyrI-like domain-containing protein -
  I6J12_RS06700 (I6J12_06700) - 1424512..1425636 (+) 1125 WP_003038525.1 PTS sugar transporter subunit IIC -
  I6J12_RS06705 (I6J12_06705) - 1425712..1426161 (+) 450 WP_003031294.1 NUDIX hydrolase -
  I6J12_RS06710 (I6J12_06710) - 1426225..1426524 (+) 300 WP_003038529.1 DUF1827 family protein -
  I6J12_RS06715 (I6J12_06715) - 1426595..1428649 (-) 2055 WP_003038639.1 cation:proton antiporter -
  I6J12_RS06720 (I6J12_06720) - 1428661..1428915 (-) 255 WP_003038587.1 hypothetical protein -

Sequence


Protein


Download         Length: 759 a.a.        Molecular weight: 84796.99 Da        Isoelectric Point: 4.9528

>NTDB_id=526801 I6J12_RS06690 WP_003038586.1 1421679..1423958(+) (clpE) [Streptococcus anginosus strain FDAARGOS_1155]
MLCQNCKINESTIHLYTNVNGKQHQVDLCQNCYQIMKTDPNNALFRGMTNMNNQNNLDPFDDFFNNLGNFQNHQEPQTPP
TQSGGGYGNGGYGSNQGGGARQQAPQQPKGLLEEFGINVTEFARRGEIDPVIGRDEEIVRVIEILNRRTKNNPVLIGEPG
VGKTAVVEGLAQKIVDGDVPHKLQGKEVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRSRQDVILFIDEIHEIVGAGSAG
DGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETITILKGIQKKYEDYHHVRYTDDAI
EAAAVLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKVIDQRLVEAENLKAQATRDEDFEKAAYFRDQIAKYKEMQ
QNKMVNQDTPIISEKTIEYIIEQKTNIPVGDLKEKEQSQLISLADDLKAHVIGQDDAVDKIAKAIRRNRVGLGTPDRPIG
SFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHSVAKLVGAPPGYVGYEEAGQLTERVRRNPYSLILLDEI
EKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKVEANVGFGAAREGRTNSVLGELGNFFSPEFMNRFD
GIIEFKSLDKENLLKIVDLMLKDVNERLATNDIHLDVTDKVKEKLVDLGYDPKMGARPLRRTIQDHIEDAITDYYLEHPS
EKELKAVMTSNGKIVIKSSKKAENEADKEIQKPADNNAN

Nucleotide


Download         Length: 2280 bp        

>NTDB_id=526801 I6J12_RS06690 WP_003038586.1 1421679..1423958(+) (clpE) [Streptococcus anginosus strain FDAARGOS_1155]
ATGCTTTGTCAAAATTGTAAAATAAATGAATCAACCATTCACCTTTACACAAATGTGAATGGAAAACAACACCAAGTTGA
CCTCTGTCAAAATTGTTATCAAATCATGAAAACAGACCCCAATAATGCTCTGTTTCGTGGAATGACCAATATGAATAATC
AAAACAACTTAGACCCGTTTGATGATTTCTTTAATAATCTTGGAAATTTCCAAAATCATCAAGAACCACAAACCCCTCCG
ACTCAATCTGGAGGCGGTTACGGCAATGGAGGTTACGGTTCCAATCAAGGTGGAGGTGCACGCCAGCAAGCTCCGCAACA
GCCTAAAGGCCTCCTAGAAGAATTTGGTATCAATGTAACCGAATTTGCTCGGCGCGGTGAAATTGACCCTGTCATCGGTC
GTGATGAGGAAATCGTCCGCGTCATTGAAATTCTCAACCGTCGAACAAAGAACAATCCAGTCCTCATAGGAGAACCCGGT
GTCGGTAAAACAGCTGTTGTAGAAGGCTTGGCCCAGAAGATTGTGGACGGTGATGTTCCACATAAACTCCAAGGAAAAGA
AGTCATCCGTTTAGATGTAGTCAGCCTAGTGCAAGGAACTGGTATCCGTGGTCAATTTGAAGAACGAATGCAAAAACTCA
TGGAGGAAATCCGTTCTCGTCAGGATGTGATTCTATTCATTGATGAAATCCATGAAATCGTTGGAGCTGGTTCTGCTGGC
GATGGAAATATGGATGCTGGAAATATCCTAAAACCAGCACTTGCTCGCGGTGAACTCCAATTAGTCGGTGCCACAACTCT
CAATGAATACCGGATTATCGAAAAAGATGCTGCACTGGAACGCCGTATGCAGCCTGTAAAAGTTGATGAACCAACAGTTG
AAGAAACGATCACTATCCTCAAAGGTATTCAAAAGAAATACGAAGACTATCACCACGTCAGATACACAGACGATGCCATT
GAAGCAGCAGCTGTCTTGTCCAATCGTTATATCCAAGATCGCTTCTTGCCTGATAAGGCCATTGACTTGCTAGACGAAGC
AGGCTCTAAGATGAATCTGACACTTAACTTTGTAGATCCAAAAGTCATTGATCAACGATTGGTAGAAGCTGAAAACCTCA
AGGCACAAGCTACTCGTGATGAGGATTTTGAAAAAGCTGCTTATTTCCGTGACCAAATTGCTAAATACAAAGAAATGCAG
CAAAATAAAATGGTAAACCAAGACACGCCTATCATCAGTGAAAAAACCATTGAGTATATCATTGAGCAAAAAACAAATAT
CCCAGTTGGTGACTTAAAAGAAAAGGAACAATCGCAACTGATTAGTCTAGCCGATGATTTGAAAGCTCATGTCATTGGTC
AAGATGATGCTGTTGATAAAATTGCGAAGGCCATTCGCCGTAATCGAGTTGGACTAGGTACACCAGACCGACCAATTGGT
TCTTTCCTTTTTGTTGGGCCAACCGGTGTCGGCAAAACAGAACTTTCTAAACAACTAGCGATTGAGCTCTTTGGTTCAGC
TGACAGCATGATTCGTTTTGATATGAGTGAGTATATGGAAAAACATAGCGTAGCAAAACTCGTCGGAGCGCCTCCAGGTT
ACGTTGGCTACGAAGAAGCTGGACAATTAACAGAACGTGTACGTCGTAATCCTTATTCTCTCATTTTACTTGATGAAATA
GAAAAAGCTCACCCAGATGTCATGCACATGTTCTTGCAGGTACTGGATGACGGACGTCTGACAGATGGACAAGGTCGGAC
AGTCAGTTTCAAAGATACGATTATCATTATGACTTCCAACGCCGGTACTGGAAAAGTTGAAGCAAACGTCGGATTTGGTG
CAGCGCGTGAAGGACGGACTAACTCTGTTCTTGGTGAATTGGGCAACTTCTTCAGTCCAGAATTTATGAACCGCTTTGAC
GGTATTATCGAATTTAAGTCCCTTGATAAGGAAAATCTCTTAAAAATCGTAGACTTGATGCTAAAAGATGTCAATGAACG
ACTTGCAACAAATGACATTCACCTAGACGTGACAGACAAAGTCAAGGAAAAATTAGTTGACTTGGGTTACGATCCGAAAA
TGGGAGCTCGTCCTCTGCGTCGGACAATCCAAGATCACATCGAAGACGCCATTACTGACTACTACCTTGAACACCCAAGT
GAAAAAGAACTCAAGGCTGTCATGACAAGCAACGGTAAAATTGTCATCAAATCGTCTAAAAAAGCTGAAAATGAAGCCGA
CAAAGAAATCCAAAAACCAGCAGATAACAATGCTAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I0S608

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  clpE Streptococcus pneumoniae Rx1

87.651

98.155

0.86

  clpE Streptococcus pneumoniae D39

87.651

98.155

0.86

  clpE Streptococcus pneumoniae R6

87.651

98.155

0.86

  clpE Streptococcus pneumoniae TIGR4

87.517

98.155

0.859

  clpE Streptococcus mutans UA159

85.542

98.419

0.842

  clpC Lactococcus lactis subsp. cremoris KW2

76.184

100

0.763

  clpC Bacillus subtilis subsp. subtilis str. 168

50.143

91.963

0.461

  clpC Lactococcus lactis subsp. lactis strain DGCC12653

47.84

82.345

0.394

  clpC Streptococcus pneumoniae Rx1

47.987

81.818

0.393

  clpC Streptococcus pneumoniae D39

47.987

81.818

0.393

  clpC Streptococcus pneumoniae TIGR4

47.826

81.818

0.391

  clpC Streptococcus mutans UA159

47.115

82.213

0.387

  clpC Streptococcus thermophilus LMD-9

46.88

82.345

0.386

  clpC Streptococcus thermophilus LMG 18311

46.795

82.213

0.385