Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   I6J12_RS01875 Genome accession   NZ_CP068060
Coordinates   377405..379207 (+) Length   600 a.a.
NCBI ID   WP_003037368.1    Uniprot ID   I0SB93
Organism   Streptococcus anginosus strain FDAARGOS_1155     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 372405..384207
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J12_RS01855 (I6J12_01855) - 373869..374186 (+) 318 WP_003037503.1 PTS cellobiose transporter subunit IIA -
  I6J12_RS01860 (I6J12_01860) - 374210..374716 (+) 507 WP_041791070.1 hypothetical protein -
  I6J12_RS01865 (I6J12_01865) celB 374756..376099 (+) 1344 WP_003037415.1 PTS cellobiose transporter subunit IIC -
  I6J12_RS01870 (I6J12_01870) coiA 376422..377453 (+) 1032 WP_003037510.1 competence protein CoiA Machinery gene
  I6J12_RS01875 (I6J12_01875) pepF 377405..379207 (+) 1803 WP_003037368.1 oligoendopeptidase F Regulator
  I6J12_RS01880 (I6J12_01880) - 379209..379892 (+) 684 WP_003037234.1 O-methyltransferase -
  I6J12_RS01885 (I6J12_01885) prsA 379999..380937 (+) 939 WP_003037344.1 peptidylprolyl isomerase PrsA -
  I6J12_RS01890 (I6J12_01890) - 381075..381644 (+) 570 WP_080553209.1 LURP-one-related/scramblase family protein -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69162.20 Da        Isoelectric Point: 4.6077

>NTDB_id=526787 I6J12_RS01875 WP_003037368.1 377405..379207(+) (pepF) [Streptococcus anginosus strain FDAARGOS_1155]
MAKQRNEIEEKYTWDLTTIFPTDEAFEAALTQVSKELKEASSLAGHLLDSADSLLKTTEIQLDLMRRIEKLYSYAHMKND
QDTRVAKYQEYQAKGMAIYSEFGQVFAFYEPEFMAITDEQYQTFLAEKPELQIYQHFFDKLLQKKPHILSQREEELLAGA
GEIFSAAGDTFGILDNADIVFPTVHDEEGNEVQLTHGNYISLVESKNRTVRKEAYEALYSVYEQYQHTYAKTLQTNVKVH
NYNAKVRNFSSAREAALSANFIPESVYDSLVSAVNKHLPLLHRYIALRAKILGLSDLKMYDLYTPLSEADYKFTYEEALT
KAEEVLAILGDDYLSRVKKAFSERWIDVHENQGKRSGAYSGGSYDTNAFMLLNWQDTLDNLFTLVHETGHSMHSSYTRET
QPYVYGDYSIFLAEIASTTNENILTEKLLEEVDDDQTRFAILNHFLDGFRGTVFRQTQFAEFEHAIHKADQEGQVLTSEF
LNDLYADLNEKYYGLTKEDNPQIQYEWARIPHFYYDYYVFQYSTGFSAASALADKIVNGTQEDKEKYLNYLKAGNSDYPL
NVIKKAGVDMEKEDYLNAAFAVFERRLDEFEALVEKLGLA

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=526787 I6J12_RS01875 WP_003037368.1 377405..379207(+) (pepF) [Streptococcus anginosus strain FDAARGOS_1155]
ATGGCAAAACAAAGAAATGAAATTGAAGAAAAATACACTTGGGACCTAACAACGATTTTCCCAACAGATGAAGCTTTTGA
GGCAGCGTTAACTCAAGTTTCAAAAGAATTAAAAGAAGCCAGCAGCTTAGCCGGTCATCTTTTGGACTCAGCTGACAGCC
TCTTAAAAACAACAGAAATCCAATTGGACTTGATGCGTCGTATCGAAAAACTCTATTCCTATGCTCACATGAAAAATGAC
CAAGATACGCGCGTGGCAAAATATCAAGAATACCAAGCAAAAGGAATGGCCATTTATAGTGAGTTCGGACAGGTCTTTGC
TTTCTATGAACCAGAATTTATGGCAATCACAGACGAGCAATATCAGACTTTCTTAGCTGAAAAGCCCGAATTGCAAATCT
ATCAGCACTTCTTTGATAAGCTACTGCAAAAGAAACCTCACATCCTTTCTCAACGTGAAGAAGAATTGTTGGCAGGAGCT
GGTGAAATTTTTAGTGCTGCGGGTGATACTTTTGGAATCTTAGACAATGCTGATATTGTCTTTCCAACCGTGCACGACGA
AGAAGGAAATGAAGTGCAATTGACGCACGGAAATTACATTAGTTTAGTGGAGTCGAAAAATCGTACAGTCCGCAAGGAAG
CTTATGAAGCGCTTTATAGCGTCTATGAGCAATACCAACATACTTATGCTAAGACACTCCAAACGAATGTTAAAGTTCAT
AATTACAATGCCAAAGTTCGTAATTTTTCTTCTGCGCGTGAAGCTGCCTTGTCTGCTAACTTTATTCCAGAAAGTGTTTA
TGATAGCTTAGTGTCTGCGGTAAACAAACATTTGCCACTCTTACATCGCTATATTGCGCTACGTGCAAAGATTTTAGGCC
TTTCTGATTTGAAAATGTACGACCTCTATACACCATTGTCAGAAGCAGATTACAAATTTACCTATGAAGAAGCTTTGACA
AAAGCAGAAGAAGTTTTAGCGATTCTCGGAGATGATTATCTTAGTCGAGTGAAAAAGGCCTTTTCAGAGCGCTGGATTGA
TGTTCATGAGAATCAAGGCAAACGCTCAGGAGCTTATTCTGGCGGTTCTTACGATACCAATGCTTTTATGTTGCTCAACT
GGCAAGATACGTTGGACAATCTTTTCACACTGGTTCATGAAACGGGGCACAGCATGCATTCCAGCTATACTCGTGAAACA
CAGCCGTACGTTTACGGAGATTATTCTATTTTCTTAGCTGAGATTGCTTCTACGACCAATGAAAATATCCTAACGGAGAA
ATTATTGGAAGAAGTAGATGACGATCAAACCCGCTTTGCGATTCTGAATCATTTCTTAGATGGCTTCCGTGGGACTGTTT
TCCGCCAAACTCAATTTGCCGAGTTTGAACATGCCATTCACAAAGCTGACCAAGAAGGTCAAGTCTTGACGAGTGAATTT
TTGAATGATTTGTACGCAGATTTGAATGAAAAATATTATGGTTTGACGAAAGAAGACAATCCACAAATTCAATACGAATG
GGCACGGATTCCGCATTTCTACTATGATTATTATGTATTCCAATATTCTACTGGTTTCTCAGCTGCTTCTGCCTTAGCAG
ATAAGATTGTCAACGGAACGCAAGAAGATAAAGAGAAGTATCTCAACTACTTGAAAGCAGGAAATTCTGATTATCCGCTG
AATGTCATTAAAAAAGCTGGTGTAGATATGGAAAAAGAAGACTACCTCAATGCTGCCTTTGCAGTTTTTGAACGTCGTCT
TGATGAATTTGAAGCACTCGTAGAAAAGTTAGGACTGGCATAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(112-181)

Peptidase family M3 (Peptidase_M3)

(202-581)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I0SB93

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

69.128

99.333

0.687