Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   I6J14_RS08655 Genome accession   NZ_CP068057
Coordinates   1706701..1707414 (-) Length   237 a.a.
NCBI ID   WP_115253182.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain FDAARGOS_1157     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1701701..1712414
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J14_RS08620 (I6J14_08620) - 1701854..1702000 (+) 147 WP_174221702.1 hypothetical protein -
  I6J14_RS08625 (I6J14_08625) - 1702029..1702964 (+) 936 WP_115253188.1 Gfo/Idh/MocA family oxidoreductase -
  I6J14_RS08630 (I6J14_08630) - 1702973..1703476 (+) 504 WP_115276473.1 GNAT family N-acetyltransferase -
  I6J14_RS08635 (I6J14_08635) nrdG 1703480..1704094 (+) 615 WP_115253186.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  I6J14_RS08640 (I6J14_08640) yaaA 1704265..1704996 (-) 732 WP_115253185.1 peroxide stress protein YaaA -
  I6J14_RS08645 (I6J14_08645) - 1705038..1705895 (-) 858 WP_115253184.1 VOC family protein -
  I6J14_RS08650 (I6J14_08650) - 1706081..1706419 (+) 339 WP_115253183.1 helix-turn-helix domain-containing protein -
  I6J14_RS08655 (I6J14_08655) treR 1706701..1707414 (-) 714 WP_115253182.1 trehalose operon repressor Regulator
  I6J14_RS08660 (I6J14_08660) treP 1707625..1709649 (+) 2025 WP_115253181.1 PTS system trehalose-specific EIIBC component -
  I6J14_RS08665 (I6J14_08665) treC 1709716..1711344 (+) 1629 WP_115253180.1 alpha,alpha-phosphotrehalase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27603.76 Da        Isoelectric Point: 9.4759

>NTDB_id=526751 I6J14_RS08655 WP_115253182.1 1706701..1707414(-) (treR) [Streptococcus dysgalactiae strain FDAARGOS_1157]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLTIDFALKEVTIDQITDHDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=526751 I6J14_RS08655 WP_115253182.1 1706701..1707414(-) (treR) [Streptococcus dysgalactiae strain FDAARGOS_1157]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATCAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAGTACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCGCTTCTCACCAAGGCAG
GCCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAGCATCATCAGATCATGTTCCCCATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGTTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATACCTGGAAAAGGAACTCCATCTCACCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCATGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679