Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   I6J15_RS05700 Genome accession   NZ_CP068056
Coordinates   1110210..1111019 (+) Length   269 a.a.
NCBI ID   WP_058814132.1    Uniprot ID   -
Organism   Streptococcus lutetiensis strain FDAARGOS_1158     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1105210..1116019
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J15_RS05675 (I6J15_05675) - 1105532..1106239 (-) 708 WP_020917225.1 amino acid ABC transporter permease -
  I6J15_RS05680 (I6J15_05680) - 1106255..1107067 (-) 813 WP_020917224.1 transporter substrate-binding domain-containing protein -
  I6J15_RS05685 (I6J15_05685) - 1107084..1107842 (-) 759 WP_020917223.1 amino acid ABC transporter ATP-binding protein -
  I6J15_RS05690 (I6J15_05690) vicR 1108154..1108864 (+) 711 WP_039696509.1 response regulator YycF Regulator
  I6J15_RS05695 (I6J15_05695) vicK 1108857..1110209 (+) 1353 WP_111712942.1 cell wall metabolism sensor histidine kinase VicK Regulator
  I6J15_RS05700 (I6J15_05700) vicX 1110210..1111019 (+) 810 WP_058814132.1 MBL fold metallo-hydrolase Regulator
  I6J15_RS05705 (I6J15_05705) rnc 1111240..1111926 (+) 687 WP_020917219.1 ribonuclease III -
  I6J15_RS05710 (I6J15_05710) smc 1112079..1115618 (+) 3540 WP_111712941.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30099.07 Da        Isoelectric Point: 5.7857

>NTDB_id=526689 I6J15_RS05700 WP_058814132.1 1110210..1111019(+) (vicX) [Streptococcus lutetiensis strain FDAARGOS_1158]
MSENAFKYSVLASGSTGNSFYVETPQKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVLARRYNLD
VYANAKTWQMIDERNMIGKLDVGQKHVFERGKTLTFGDIDIESFGVSHDAVDPQFYRLMKDNKSFVVLTDTGYVSDRMAG
VIENADGYLIESNHDVEILRAGSYPWSLKQRILSDRGHLSNEDGADTMIRTIGNRTKKIYLGHLSKENNIKELAHMTMEN
NLMKADFAVGHDMTVFDTSPDEAMPLAGL

Nucleotide


Download         Length: 810 bp        

>NTDB_id=526689 I6J15_RS05700 WP_058814132.1 1110210..1111019(+) (vicX) [Streptococcus lutetiensis strain FDAARGOS_1158]
ATGTCTGAGAATGCTTTTAAATACAGTGTCTTAGCCTCCGGTTCAACTGGAAATTCATTTTATGTGGAAACGCCACAGAA
ACGTCTTTTGATAGATGCAGGTTTGACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGAAAACCAGAAGATT
TGGATGCTATTTTGATTACGCACGAACACTCTGACCATATTAAAGGAGTTGGAGTGCTGGCTCGCAGATACAATCTTGAT
GTATATGCCAATGCCAAAACTTGGCAAATGATTGATGAGCGCAACATGATTGGAAAACTTGACGTTGGGCAAAAACATGT
CTTTGAACGTGGTAAAACATTGACTTTTGGTGATATTGATATTGAAAGTTTTGGAGTCAGTCACGATGCTGTCGATCCGC
AATTTTACCGTTTGATGAAAGATAATAAGTCATTTGTCGTTCTGACAGATACGGGTTACGTTAGTGACCGAATGGCGGGT
GTGATTGAAAATGCTGATGGTTATCTGATTGAGTCAAACCATGATGTTGAGATTTTGCGTGCAGGTTCTTATCCATGGAG
CTTGAAACAACGTATTCTATCTGATCGTGGTCACTTGTCAAATGAAGATGGTGCTGATACCATGATTCGTACTATCGGCA
ATCGCACAAAGAAAATTTACCTTGGTCACTTGAGTAAAGAAAATAATATCAAAGAATTGGCTCATATGACTATGGAAAAT
AACTTGATGAAAGCCGATTTTGCTGTTGGTCATGACATGACCGTTTTTGATACATCACCTGATGAAGCAATGCCTTTAGC
AGGTCTATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.903

99.257

0.773