Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   I6J15_RS01300 Genome accession   NZ_CP068056
Coordinates   263092..263817 (-) Length   241 a.a.
NCBI ID   WP_111712638.1    Uniprot ID   -
Organism   Streptococcus lutetiensis strain FDAARGOS_1158     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 258092..268817
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J15_RS01275 (I6J15_01275) - 259147..260178 (-) 1032 WP_111712641.1 sensor domain-containing diguanylate cyclase -
  I6J15_RS01285 (I6J15_01285) trmB 260543..261181 (-) 639 WP_111712640.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  I6J15_RS01290 (I6J15_01290) ccrZ 261181..261948 (-) 768 WP_288573826.1 cell cycle regulator CcrZ -
  I6J15_RS01295 (I6J15_01295) - 262055..263089 (-) 1035 WP_111712639.1 ABC transporter permease -
  I6J15_RS01300 (I6J15_01300) pptA 263092..263817 (-) 726 WP_111712638.1 ABC transporter ATP-binding protein Regulator
  I6J15_RS01305 (I6J15_01305) - 263881..264300 (+) 420 WP_111712637.1 HIT family protein -
  I6J15_RS01310 (I6J15_01310) - 264297..264602 (+) 306 WP_058833229.1 hypothetical protein -
  I6J15_RS01315 (I6J15_01315) brpA 264688..265848 (-) 1161 WP_111712636.1 biofilm formation/cell division transcriptional regulator BrpA -
  I6J15_RS01320 (I6J15_01320) - 265859..266371 (-) 513 WP_111698233.1 GNAT family N-acetyltransferase -
  I6J15_RS01325 (I6J15_01325) tsaE 266364..266807 (-) 444 WP_058813650.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  I6J15_RS01330 (I6J15_01330) - 266982..268403 (-) 1422 WP_111712635.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26744.07 Da        Isoelectric Point: 4.6835

>NTDB_id=526654 I6J15_RS01300 WP_111712638.1 263092..263817(-) (pptA) [Streptococcus lutetiensis strain FDAARGOS_1158]
MLKIENVTGGYINIPVLKNISFEVGDGELVGLIGLNGAGKSTTINEVIGLLTPYQGKITLDGLTLADNQAEYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDLDFDQAMARAKELLKLFRLSDKLEWFPINFSKGMKQKVMIVCAFMIDPYLFIVDEPF
LGLDPLAISDLTDLLAQEKAKGKAILMSTHVLDAAEKMCDRFVILHHGQVRAMGNLAELRQAFGQEDASLNDIYIASTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=526654 I6J15_RS01300 WP_111712638.1 263092..263817(-) (pptA) [Streptococcus lutetiensis strain FDAARGOS_1158]
ATGTTAAAAATTGAAAATGTCACAGGTGGATACATTAATATCCCTGTTTTAAAAAATATTTCTTTTGAAGTTGGTGACGG
TGAGTTGGTCGGCTTGATTGGGCTAAATGGTGCTGGGAAGTCAACGACGATTAATGAAGTTATCGGACTTTTGACGCCTT
ATCAAGGAAAGATTACGCTTGACGGCTTGACTTTGGCTGATAACCAAGCAGAGTATCGCAAAAAGATTGGCTTTATTCCT
GAAACGCCAAGCTTGTATGAAGAGTTAACTTTACGTGAGCATTTAGAGACGGTTGCTATGGCTTATGACCTTGATTTTGA
TCAAGCGATGGCGCGTGCTAAGGAATTGCTAAAACTTTTCCGTCTGTCTGATAAGCTTGAATGGTTCCCGATTAATTTTT
CAAAAGGGATGAAGCAAAAGGTTATGATTGTGTGCGCCTTTATGATTGATCCTTATTTGTTTATCGTTGATGAGCCATTT
TTGGGACTAGATCCTTTGGCGATTTCTGATTTAACGGATTTGCTAGCGCAGGAAAAAGCAAAAGGCAAAGCTATTTTGAT
GTCAACACACGTGTTAGATGCTGCTGAAAAAATGTGTGATCGATTTGTGATTTTGCATCATGGTCAAGTGCGTGCAATGG
GAAATCTAGCTGAATTGCGTCAAGCTTTTGGTCAAGAAGATGCTAGTTTGAACGATATTTACATAGCTTCAACTAAAGAG
GGATAG

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

76.987

99.17

0.763
  pptA Streptococcus thermophilus LMD-9

75.732

99.17

0.751