Detailed information NTG0052656

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: BN148_RS05710
• Genome accession: NC_018521
• Coordinates: 1080908..1081867 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni NCTC 11168-BN148
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1075908..1086867

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BN148_RS05685 (BN148_1142)	neuC	1076478..1077593 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
BN148_RS09215	-	1077590..1078504 (+)	915	Protein_1092	beta-1,4-N-acetylgalactosaminyltransferase	-
BN148_RS09220	-	1078538..1079200 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
BN148_RS05700 (BN148_1145c)	-	1079195..1080041 (-)	847	Protein_1094	glycosyltransferase	-
BN148_RS05705 (BN148_1146c)	waaV	1080025..1080849 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
BN148_RS05710 (BN148_1148)	waaF	1080908..1081867 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
BN148_RS05715 (BN148_1149c)	gmhA	1081848..1082408 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
BN148_RS05720 (BN148_1150c)	rfaE1	1082405..1083790 (-)	1386	WP_002858114.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
BN148_RS05725 (BN148_1151c)	rfaD	1083783..1084736 (-)	954	WP_002858041.1	ADP-glyceromanno-heptose 6-epimerase	-
BN148_RS05730 (BN148_1152c)	gmhB	1084737..1085297 (-)	561	WP_002853963.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
BN148_RS05735 (BN148_1153)	-	1085379..1085681 (+)	303	WP_002852762.1	cytochrome c	-
BN148_RS05740 (BN148_1154c)	ccoS	1085704..1085910 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=52656 BN148_RS05710 WP_002875425.1 1080908..1081867(+) (waaF) [Campylobacter jejuni subsp. jejuni NCTC 11168-BN148]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=52656 BN148_RS05710 WP_002875425.1 1080908..1081867(+) (waaF) [Campylobacter jejuni subsp. jejuni NCTC 11168-BN148]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1