Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   I6J18_RS09605 Genome accession   NZ_CP068053
Coordinates   1850825..1851007 (-) Length   60 a.a.
NCBI ID   WP_040374450.1    Uniprot ID   -
Organism   Peribacillus psychrosaccharolyticus strain FDAARGOS_1161     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1845825..1856007
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J18_RS09580 (I6J18_09575) - 1846314..1847066 (-) 753 WP_040374446.1 YjbA family protein -
  I6J18_RS09585 (I6J18_09580) - 1847168..1847935 (-) 768 WP_040374447.1 DUF2268 domain-containing protein -
  I6J18_RS09590 (I6J18_09585) fabF 1848112..1849353 (-) 1242 WP_040374448.1 beta-ketoacyl-ACP synthase II -
  I6J18_RS09595 (I6J18_09590) - 1849409..1850347 (-) 939 WP_040374449.1 beta-ketoacyl-ACP synthase III -
  I6J18_RS09600 (I6J18_09595) - 1850548..1850799 (+) 252 WP_201648139.1 hypothetical protein -
  I6J18_RS09605 (I6J18_09600) comZ 1850825..1851007 (-) 183 WP_040374450.1 ComZ family protein Regulator
  I6J18_RS09610 (I6J18_09605) - 1851094..1851888 (-) 795 WP_040374451.1 hypothetical protein -
  I6J18_RS09615 (I6J18_09610) - 1851981..1852703 (-) 723 WP_040374452.1 hypothetical protein -
  I6J18_RS09620 (I6J18_09615) - 1852925..1853113 (+) 189 WP_040374453.1 YjzD family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6845.00 Da        Isoelectric Point: 4.3308

>NTDB_id=526551 I6J18_RS09605 WP_040374450.1 1850825..1851007(-) (comZ) [Peribacillus psychrosaccharolyticus strain FDAARGOS_1161]
MSEDKTLEFMGIAMKYFPEAKAKLDASGIDFTMDLAEPFMDLFKKIMQEAYELGIKDATK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=526551 I6J18_RS09605 WP_040374450.1 1850825..1851007(-) (comZ) [Peribacillus psychrosaccharolyticus strain FDAARGOS_1161]
ATGTCAGAAGATAAAACATTAGAATTTATGGGGATTGCAATGAAGTACTTCCCAGAGGCAAAAGCAAAATTAGACGCTTC
AGGTATTGATTTCACAATGGATTTAGCTGAGCCGTTTATGGATTTATTTAAAAAAATTATGCAAGAAGCATATGAACTGG
GAATAAAAGATGCAACGAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

56.897

96.667

0.55