Detailed information NTG0052646

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: PA1R_RS18135
• Genome accession: NC_022806
• Coordinates: 3940971..3941996 (+)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa PA1R
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3935971..3946996

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PA1R_RS18110 (PA1R_gp3525)	-	3936159..3936476 (-)	318	WP_003120685.1	tetratricopeptide repeat protein	-
PA1R_RS18115 (PA1R_gp3526)	trkA	3936625..3937998 (-)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
PA1R_RS18120 (PA1R_gp3527)	rsmB	3938026..3939330 (-)	1305	WP_003114643.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
PA1R_RS18125 (PA1R_gp3528)	fmt	3939327..3940271 (-)	945	WP_023110565.1	methionyl-tRNA formyltransferase	-
PA1R_RS18130 (PA1R_gp3529)	def	3940326..3940832 (-)	507	WP_003107059.1	peptide deformylase	-
PA1R_RS18135 (PA1R_gp3530)	tsaP	3940971..3941996 (+)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
PA1R_RS18140 (PA1R_gp3531)	dprA	3942131..3943219 (+)	1089	WP_023110564.1	DNA-processing protein DprA	Machinery gene
PA1R_RS18145 (PA1R_gp3532)	-	3943260..3943817 (+)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
PA1R_RS18150 (PA1R_gp3533)	-	3943827..3944804 (-)	978	WP_003097303.1	NADPH:quinone reductase	-
PA1R_RS18155 (PA1R_gp3534)	hemF	3944995..3945912 (+)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
PA1R_RS18160 (PA1R_gp3535)	aroE	3945970..3946794 (+)	825	WP_003097314.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=52646 PA1R_RS18135 WP_003097294.1 3940971..3941996(+) (tsaP) [Pseudomonas aeruginosa PA1R]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=52646 PA1R_RS18135 WP_003097294.1 3940971..3941996(+) (tsaP) [Pseudomonas aeruginosa PA1R]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACACTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTATGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393