Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   JJQ97_RS02485 Genome accession   NZ_CP068034
Coordinates   542015..542425 (+) Length   136 a.a.
NCBI ID   WP_002551738.1    Uniprot ID   A0AAT9SFQ2
Organism   Pseudomonas syringae strain BIM B-268     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 537015..547425
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JJQ97_RS02460 (JJQ97_02105) pyrR 537876..538388 (-) 513 WP_004409370.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  JJQ97_RS02465 (JJQ97_02110) ruvX 538644..539084 (-) 441 WP_002551734.1 Holliday junction resolvase RuvX -
  JJQ97_RS02470 (JJQ97_02115) - 539084..539656 (-) 573 WP_201419161.1 YqgE/AlgH family protein -
  JJQ97_RS02475 (JJQ97_02120) - 539732..540634 (-) 903 WP_201419162.1 energy transducer TonB -
  JJQ97_RS02480 (JJQ97_02125) gshB 540801..541760 (-) 960 WP_003316740.1 glutathione synthase -
  JJQ97_RS02485 (JJQ97_02130) pilG 542015..542425 (+) 411 WP_002551738.1 twitching motility response regulator PilG Regulator
  JJQ97_RS02490 (JJQ97_02135) pilH 542472..542837 (+) 366 WP_003316741.1 twitching motility response regulator PilH -
  JJQ97_RS02495 (JJQ97_02140) - 542852..543391 (+) 540 WP_201419163.1 chemotaxis protein CheW -
  JJQ97_RS02500 (JJQ97_02145) - 543442..545484 (+) 2043 WP_003414357.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14943.42 Da        Isoelectric Point: 8.5283

>NTDB_id=526443 JJQ97_RS02485 WP_002551738.1 542015..542425(+) (pilG) [Pseudomonas syringae strain BIM B-268]
MEQHASALKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIKAHVPGFVAAEQHIS

Nucleotide


Download         Length: 411 bp        

>NTDB_id=526443 JJQ97_RS02485 WP_002551738.1 542015..542425(+) (pilG) [Pseudomonas syringae strain BIM B-268]
ATGGAACAACACGCCTCCGCCCTGAAAGTCATGGTCATCGATGATTCGAAGACCATCCGCCGCACCGCCGAAACACTGCT
CAAGAACGCAGGTTGTGAAGTCATCACTGCGATAGACGGTTTCGACGCGCTGGCCAAGATTGCCGATAACCACCCGCGAA
TCATATTCGTCGATATCATGATGCCGCGTCTGGACGGTTATCAGACCTGCGCGCTGATCAAGAACAATCGTGCATTCAAG
TCGACGCCGGTCATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAGCGCGATCAAGGCTCATGTGCCGGGCTTCGTTGCAGCAGAACAAC
ACATATCATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

91.912

0.691