Detailed information NTG0526426

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K5P76_RS22215
• Genome accession: NZ_CP082127
• Coordinates: 4625828..4626853 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain NDM_12_14482
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4620828..4631853

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K5P76_RS22195 (K5P76_22195)	metJ	4621889..4622206 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
K5P76_RS22200 (K5P76_22200)	yiiX	4622390..4622998 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
K5P76_RS22205 (K5P76_22205)	rpmE	4623059..4623271 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
K5P76_RS22210 (K5P76_22210)	priA	4623474..4625672 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
K5P76_RS22215 (K5P76_22215)	cytR	4625828..4626853 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
K5P76_RS22220 (K5P76_22220)	ftsN	4626945..4627904 (+)	960	WP_000068828.1	cell division protein FtsN	-
K5P76_RS22225 (K5P76_22225)	hslV	4627997..4628527 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
K5P76_RS22230 (K5P76_22230)	hslU	4628537..4629868 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
K5P76_RS22235 (K5P76_22235)	menA	4629935..4630861 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K5P76_RS22240 (K5P76_22240)	rraA	4630954..4631439 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K5P76_RS22245 (K5P76_22245)	zapB	4631524..4631769 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=526426 K5P76_RS22215 WP_000644904.1 4625828..4626853(+) (cytR) [Escherichia coli strain NDM_12_14482]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=526426 K5P76_RS22215 WP_000644904.1 4625828..4626853(+) (cytR) [Escherichia coli strain NDM_12_14482]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628