Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   DMB75_RS01320 Genome accession   NZ_CP068031
Coordinates   308141..308806 (+) Length   221 a.a.
NCBI ID   WP_130547847.1    Uniprot ID   -
Organism   Staphylococcus saccharolyticus strain DVP5-16-4677     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 303141..313806
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DMB75_RS01295 (DMB75_001295) - 303186..303806 (+) 621 WP_130547844.1 acetyltransferase -
  DMB75_RS01300 (DMB75_001300) - 303812..304954 (+) 1143 WP_274380080.1 DegT/DnrJ/EryC1/StrS family aminotransferase -
  DMB75_RS01305 (DMB75_001305) - 304958..305899 (+) 942 WP_130547845.1 LCP family protein -
  DMB75_RS01310 (DMB75_001310) - 306150..307631 (-) 1482 WP_130547846.1 alkaline phosphatase -
  DMB75_RS01315 (DMB75_001315) - 307953..308108 (+) 156 WP_165417837.1 hypothetical protein -
  DMB75_RS01320 (DMB75_001320) braR 308141..308806 (+) 666 WP_130547847.1 response regulator transcription factor Regulator
  DMB75_RS01325 (DMB75_001325) braS 308812..309708 (+) 897 WP_130547848.1 sensor histidine kinase Regulator
  DMB75_RS01330 (DMB75_001330) - 309819..310576 (+) 758 Protein_274 ABC transporter ATP-binding protein -
  DMB75_RS01335 (DMB75_001335) - 310578..312568 (+) 1991 Protein_275 FtsX-like permease family protein -
  DMB75_RS01340 (DMB75_001340) - 312700..313131 (+) 432 WP_130559127.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25487.56 Da        Isoelectric Point: 4.4749

>NTDB_id=526390 DMB75_RS01320 WP_130547847.1 308141..308806(+) (braR) [Staphylococcus saccharolyticus strain DVP5-16-4677]
MKILIVEDDLVIAESLANELFKWNYEVVAVDNFEQIMEDFHEVAPPLVLLDINLPTLNGFHWCQEMRKESNVPIMFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSLSRNELGVKGCKLILDEAKIINGDDTVQLSLTELQILK
LLFQSEDKYVNHTALIEKCWESENFIDDNTLAVNMTRLRKKLLFIGLTDFIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=526390 DMB75_RS01320 WP_130547847.1 308141..308806(+) (braR) [Staphylococcus saccharolyticus strain DVP5-16-4677]
ATGAAGATTCTCATAGTAGAAGATGACCTAGTGATTGCAGAAAGCTTAGCGAATGAGCTTTTTAAATGGAATTATGAGGT
AGTTGCTGTAGACAATTTCGAGCAAATTATGGAAGATTTTCACGAAGTTGCACCTCCACTTGTTTTGTTGGATATTAATT
TGCCGACACTCAATGGTTTTCATTGGTGTCAGGAAATGCGTAAAGAATCTAATGTTCCAATTATGTTTATTAGTTCTCGT
ATAGACAATATGGATCAAATTATGGCTATTCAAATGGGTGGCGATGATTTTATTGAGAAACCTTTCAATTTATCTTTAAC
TGTTGCTAAAATTCAAGCACTTTTACGTCGTACTTATGATTTATCTCTATCTAGAAATGAACTTGGAGTAAAAGGGTGCA
AGCTAATCTTAGATGAAGCAAAAATTATAAATGGTGATGACACTGTGCAGCTATCTCTGACAGAGCTGCAGATTTTAAAG
CTATTGTTTCAAAGTGAGGATAAATATGTGAATCATACAGCGTTAATTGAAAAATGTTGGGAATCTGAAAATTTCATTGA
CGATAATACACTTGCTGTAAATATGACTCGATTGCGTAAAAAACTGCTTTTCATAGGATTAACTGACTTTATTGAAACTA
AGAAAAATGTTGGATACAGGGTTTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

79.186

100

0.792