Detailed information NTG0526349

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: JKJ11_RS15595
• Genome accession: NZ_CP068024
• Coordinates: 3337333..3338340 (+)
• Length: 335 a.a.
• NCBI ID: WP_006071173.1
• Uniprot ID: A0A084T383
• Organism: Vibrio sp. SCSIO 43133
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3332333..3343340

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JKJ11_RS15575 (JKJ11_15570)	metJ	3332425..3332745 (+)	321	WP_006071165.1	met regulon transcriptional regulator MetJ	-
JKJ11_RS15580 (JKJ11_15575)	-	3332812..3334071 (-)	1260	WP_006071167.1	malic enzyme-like NAD(P)-binding protein	-
JKJ11_RS15585 (JKJ11_15580)	rpmE	3334358..3334576 (-)	219	WP_006071169.1	50S ribosomal protein L31	-
JKJ11_RS15590 (JKJ11_15585)	priA	3334860..3337061 (+)	2202	WP_252039131.1	primosomal protein N'	-
JKJ11_RS15595 (JKJ11_15590)	cytR	3337333..3338340 (+)	1008	WP_006071173.1	DNA-binding transcriptional regulator CytR	Regulator
JKJ11_RS15600 (JKJ11_15595)	-	3338423..3338971 (+)	549	WP_252038477.1	SPOR domain-containing protein	-
JKJ11_RS15605 (JKJ11_15600)	hslV	3339200..3339733 (+)	534	WP_252038478.1	ATP-dependent protease subunit HslV	-
JKJ11_RS15610 (JKJ11_15605)	hslU	3339780..3341114 (+)	1335	WP_124940370.1	HslU--HslV peptidase ATPase subunit	-
JKJ11_RS15615 (JKJ11_15610)	-	3341226..3342143 (+)	918	WP_252038479.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
JKJ11_RS15620 (JKJ11_15615)	rraA	3342223..3342732 (+)	510	WP_062462553.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36922.56 Da
• Isoelectric Point: 6.1431

>NTDB_id=526349 JKJ11_RS15595 WP_006071173.1 3337333..3338340(+) (cytR) [Vibrio sp. SCSIO 43133]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQSKKRETSFVNLVFTKQADGMLLLGTDLPFDISKPEQKNLPPIVMACEFAPELELPTVHIDN
LTSAFEAVNYLSQLGHKRIAQISGPDTAFLCRFRQQGYQQALRRAGLQMNPAYTVKGDFTFEAGARLIRSLLALPEPPTA
IFCHNDIMAIGAMQEAKKLGLRVPQDLSVVGFDDIQFAQYCDPPLTTVSQPRYEIGRQAMYMMLEVLKGADVRAGSRLLD
TELVIRDSAAPPRIL

Nucleotide

• Length: 1008 bp

>NTDB_id=526349 JKJ11_RS15595 WP_006071173.1 3337333..3338340(+) (cytR) [Vibrio sp. SCSIO 43133]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGCGTCTCAACGGCTACGGTATCAAGAGCATTGATGAATCCCGAGAA
GGTCTCATCATCTACTCGAAAGCGAGTCGAAGATGCCGTTCTCGAAGCTGGCTATTCTCCTAATTCTCTGGCGCGTAACT
TACGTAGGAATGAATCCAAGACGATCGTTACCATAGTGCCAGACATCTGTGACCCGTACTTTTCGGAAATCATTCGTGGT
ATCGAAGATGCGGCAATGGAACATGGGTATTTGGTTCTACTAGGAGATAGCGGACAATCGAAAAAGCGTGAAACCTCGTT
TGTGAACTTGGTCTTCACTAAGCAAGCGGATGGCATGCTTTTACTCGGCACCGACTTGCCTTTTGATATCAGTAAGCCAG
AACAGAAAAACTTACCTCCCATCGTTATGGCCTGTGAGTTTGCCCCTGAACTTGAGCTCCCTACCGTTCATATCGACAAC
CTGACCTCAGCCTTTGAAGCAGTAAACTATTTGTCGCAATTGGGACATAAGCGTATCGCACAGATTTCAGGACCTGACAC
CGCATTTTTATGCCGTTTTAGACAGCAAGGTTACCAGCAAGCGTTGCGAAGAGCCGGACTGCAAATGAACCCTGCGTACA
CGGTGAAAGGTGACTTTACCTTTGAAGCGGGTGCACGTTTGATTCGCAGCCTACTTGCCCTGCCGGAGCCTCCAACAGCC
ATTTTCTGTCATAACGACATCATGGCCATTGGCGCGATGCAAGAAGCGAAGAAACTGGGACTGCGAGTTCCTCAAGATCT
TTCCGTAGTTGGTTTCGATGACATTCAGTTCGCTCAGTATTGCGATCCTCCGCTTACCACAGTCTCACAACCTCGTTATG
AGATTGGCCGCCAAGCCATGTACATGATGTTAGAAGTACTGAAAGGCGCCGATGTTCGAGCGGGATCGAGGTTACTTGAT
ACTGAACTTGTGATCCGCGACAGTGCTGCTCCTCCAAGAATCCTATAG

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

3D structure

• AlphaFold DB: A0A084T383

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.157	99.104	0.884
cytR	Vibrio parahaemolyticus RIMD 2210633	87.988	99.403	0.875