Detailed information NTG0526338

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: JKJ11_RS14370
• Genome accession: NZ_CP068024
• Coordinates: 3073552..3076938 (+)
• Length: 1128 a.a.
• NCBI ID: WP_252038370.1
• Uniprot ID: -
• Organism: Vibrio sp. SCSIO 43133
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 3068552..3081938

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JKJ11_RS14350 (JKJ11_14340)	erpA	3068880..3069221 (-)	342	WP_006072684.1	iron-sulfur cluster insertion protein ErpA	-
JKJ11_RS14355 (JKJ11_14345)	hemL	3069525..3070817 (+)	1293	WP_124940246.1	glutamate-1-semialdehyde 2,1-aminomutase	-
JKJ11_RS14360 (JKJ11_14350)	-	3071144..3072229 (+)	1086	WP_038222615.1	AI-2E family transporter	-
JKJ11_RS14365 (JKJ11_14355)	rsmC	3072296..3073318 (+)	1023	WP_252038369.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
JKJ11_RS14370 (JKJ11_14360)	chiS	3073552..3076938 (+)	3387	WP_252038370.1	response regulator	Regulator
JKJ11_RS14375 (JKJ11_14365)	acnB	3077039..3079636 (-)	2598	WP_252038371.1	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127411.24 Da
• Isoelectric Point: 5.4045

>NTDB_id=526338 JKJ11_RS14370 WP_252038370.1 3073552..3076938(+) (chiS) [Vibrio sp. SCSIO 43133]
MFKLYRKQKFKRLQNTLMMAFLVLSITPLTVIALFFLNAHSQDLKDQSTSHLVSIRDTKKQQLINYFQAQESEVMGFVRS
ELAYASGGRFYGLVNAFQRLGDDIEQAREHAQERYIQGSGNQVKTAILPDSSSYVGSERYRLLHKRYHRAFMEHLKRSDF
DDIILVDLAGNVTYSVYKNRYYGTNLETGEFSTQILGETFDRLKSEVTHKRKENEEYTPVVISDFALQDDQQYAWLGAPI
IQQGYLHSYAMFRLPIKGITKLITDGKPDDIKLLLVGSDHAAKILGLEQDTIDNSNEVISQALSGLTMVGSYTNAKGEDY
FAAFTPIQLNETNWALVAETPEAIAFASVKQLEKLFVIAMLTAIVLVVIASHYLSNFITSPLLKLTWAAERASGGDLEPS
IISADRKDEIGRLALSFERMRRSIKEKIELIKSQNQELEQNLVTIKKQNEELQLANKLKDEFLATTSHELRTPLHGMIGI
AEAMISGANGPIGANHKYQLDIIVNSGQRLAGLVDDLLDYHKMRYGNLDIERSAISLTGATQLVLELSHHLLGEKKIRII
NQVLEPLPYVSADPQRLEQVLYNLVGNAIKYTNEGKIVLSATAMDDHIRVQVVDTGQGIPAQQLEHIFEPLVQAGHDSGH
YRQGAGLGLSISRQLIELMGGSLYVSSQPHVGTTFSFTLPLATQEEIEHMSQLGQNSHFHIAEPTEINPEEEEVLPENPD
GPVLLVADDEPVNLRILESFLRLEGYQVKLAKDGLETLDIIEHEKPDLLLLDIMMPGMSGFEVCETIREQYDHAALPIIM
LTALNQSEDRVRGFELGANDYLAKPFSKPELAARIAAHLQASKAEERRAENQLLKYEIKQRALVEASLLETQGRLIEQLD
SAPEAILCIREDLKVQFANQSAGRMFKRSVERLKRSNVEELIAPKFIHLSQEHYCGDIDIFVDDVRQHINTDILTLPEGS
GLKSIYIFEQGQSLDQTRVKNLETAIDALSRYAIEGDKAKLLELKELGGEFTQLADKAVDEEKSRPELMRELLVDTMTNA
LEYWESVTGQSKFAFAEQSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSVEYILDHCHRQGPERDHIIALRD
KLQKLLTN

Nucleotide

• Length: 3387 bp

>NTDB_id=526338 JKJ11_RS14370 WP_252038370.1 3073552..3076938(+) (chiS) [Vibrio sp. SCSIO 43133]
ATGTTCAAGTTGTATCGAAAACAGAAATTCAAGCGACTGCAAAACACCTTGATGATGGCTTTTTTGGTGCTCAGCATTAC
GCCCTTGACGGTCATCGCTCTATTCTTTCTCAACGCACACAGTCAGGATCTAAAAGATCAAAGTACCTCTCATCTGGTAT
CGATAAGAGATACTAAAAAACAGCAGTTGATCAACTACTTTCAAGCTCAAGAGTCTGAAGTCATGGGATTTGTACGTTCA
GAGCTAGCTTATGCCAGTGGTGGGCGATTCTATGGACTGGTAAATGCGTTTCAGCGCCTCGGTGACGATATAGAACAAGC
AAGAGAACATGCGCAAGAACGCTATATTCAAGGTTCAGGCAATCAAGTAAAAACCGCAATCCTTCCAGACTCTAGTAGTT
ATGTAGGAAGTGAGCGCTACCGTCTTCTACACAAGCGCTATCATAGGGCGTTTATGGAGCACCTGAAACGCTCAGATTTT
GATGACATCATACTGGTCGATCTTGCAGGCAACGTCACCTACTCCGTCTATAAAAATCGCTATTACGGCACAAATTTAGA
AACGGGCGAGTTTTCAACTCAGATCCTTGGCGAAACCTTTGATCGTTTGAAATCTGAAGTCACTCACAAGCGCAAAGAAA
ACGAAGAGTACACCCCGGTTGTTATTTCCGATTTTGCCCTACAAGATGACCAACAGTACGCTTGGCTTGGTGCACCGATT
ATCCAGCAAGGTTATCTTCACAGTTATGCCATGTTCAGGCTTCCCATCAAGGGAATCACTAAACTCATCACTGACGGCAA
ACCAGATGATATTAAGCTGCTGCTGGTCGGTAGTGACCATGCCGCCAAGATACTTGGGCTTGAACAAGACACCATAGACA
ACAGCAACGAAGTTATCTCACAAGCCTTATCGGGACTCACCATGGTGGGTAGCTACACCAATGCCAAAGGCGAAGACTAC
TTTGCGGCATTCACTCCTATTCAACTCAATGAAACCAATTGGGCACTGGTTGCCGAAACACCAGAGGCCATCGCCTTTGC
TAGCGTTAAGCAACTAGAAAAACTGTTTGTTATTGCAATGCTGACCGCGATTGTACTGGTTGTCATTGCTTCACACTACC
TTTCTAACTTTATTACGTCGCCACTGCTTAAGCTTACTTGGGCAGCCGAAAGAGCCTCTGGTGGAGACTTAGAACCTTCG
ATTATTAGCGCAGACCGTAAAGATGAGATTGGCCGATTGGCTCTGAGTTTCGAGCGTATGAGGCGCTCAATAAAAGAGAA
GATCGAGCTCATTAAGAGTCAGAACCAAGAGCTAGAGCAGAATTTAGTCACTATTAAAAAGCAAAACGAAGAATTACAGC
TAGCAAACAAGCTGAAAGATGAATTCCTTGCAACCACCTCTCACGAACTTCGCACTCCACTTCACGGCATGATTGGGATT
GCAGAGGCCATGATCTCAGGTGCCAATGGGCCAATCGGCGCCAACCATAAATATCAGCTTGATATCATCGTTAACAGTGG
CCAGCGCCTTGCTGGATTGGTGGACGATCTTCTCGATTATCACAAGATGCGTTACGGCAACTTAGATATTGAACGTTCTG
CTATCAGCTTAACCGGTGCAACACAGCTGGTCTTGGAGCTGTCACATCACTTGCTTGGTGAAAAGAAGATTCGAATTATC
AATCAAGTCCTCGAACCATTGCCTTATGTCTCAGCCGACCCACAGCGCTTAGAACAGGTACTTTATAACCTTGTAGGTAA
TGCCATCAAATACACCAATGAAGGTAAGATCGTATTATCGGCCACCGCCATGGATGATCATATTCGTGTACAAGTAGTAG
ATACTGGCCAAGGGATTCCTGCTCAGCAGCTTGAACATATTTTCGAGCCGTTGGTTCAAGCTGGCCATGATTCAGGTCAT
TACCGCCAAGGTGCAGGGCTTGGCTTATCGATAAGTCGACAGCTTATTGAGTTAATGGGCGGTTCTCTTTATGTCAGTAG
TCAGCCTCATGTTGGCACCACGTTCAGCTTCACCCTTCCTTTAGCGACACAGGAAGAAATAGAGCATATGTCTCAATTAG
GACAAAATAGTCACTTCCATATCGCCGAGCCGACTGAGATCAATCCCGAAGAAGAGGAAGTCCTTCCTGAGAATCCTGAT
GGACCAGTGTTGCTTGTCGCCGATGATGAGCCAGTGAATTTACGTATCCTAGAGAGCTTTTTAAGACTAGAAGGCTATCA
AGTGAAATTGGCCAAAGATGGCTTAGAAACACTGGATATCATTGAGCATGAAAAACCAGACTTACTGCTACTCGATATTA
TGATGCCTGGAATGAGTGGCTTTGAAGTGTGTGAAACCATTCGTGAACAATACGATCATGCCGCGCTGCCTATCATTATG
CTCACTGCTTTGAATCAATCAGAAGACAGAGTTCGTGGTTTTGAACTCGGTGCCAATGACTACCTTGCAAAACCGTTCAG
TAAGCCGGAGCTAGCGGCACGTATCGCCGCTCACCTTCAAGCAAGCAAAGCTGAAGAGAGACGCGCCGAAAATCAACTTC
TCAAGTATGAAATCAAGCAACGTGCGTTGGTTGAAGCAAGTTTGTTAGAAACACAAGGGCGTTTGATCGAGCAACTCGAT
AGTGCGCCGGAAGCGATTCTATGCATCCGAGAAGACCTCAAGGTACAGTTTGCTAACCAAAGTGCCGGACGTATGTTTAA
ACGCAGTGTTGAACGGCTCAAACGCTCCAATGTTGAAGAGCTAATTGCGCCTAAATTTATTCACTTGTCTCAGGAGCATT
ATTGCGGCGATATCGATATTTTTGTCGATGATGTACGCCAACATATAAACACCGATATTCTCACCTTACCTGAAGGTTCG
GGGTTAAAGAGCATTTACATATTCGAACAAGGGCAGTCCCTAGATCAAACGCGCGTGAAGAACCTAGAAACCGCTATTGA
TGCGTTATCTCGATATGCGATTGAAGGTGATAAGGCGAAACTGCTGGAACTCAAAGAGCTGGGCGGAGAATTTACTCAAT
TAGCGGATAAAGCCGTCGATGAAGAGAAGTCTCGTCCTGAATTGATGCGCGAGTTATTGGTAGATACCATGACCAATGCG
CTGGAGTATTGGGAAAGTGTTACTGGACAAAGCAAATTTGCCTTTGCTGAACAAAGTGGCTTGTGGCGTGTTTACTTGGA
CCGCAGTACCTTGCAAACGCGCACATTGGATAAGTATTTGCGCGTAGAGACTTTACCTAAAACACCTCGTTGGCGCACAG
TACTCAGCTCAGTAGAATACATACTCGACCATTGTCACCGTCAAGGCCCAGAGCGTGACCATATTATTGCTCTGCGCGAC
AAGCTGCAAAAGTTGCTGACCAATTAG

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (374-425)

• Response regulator receiver domain (Response_reg) (725-835)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (573-682)

• His Kinase A (phospho-acceptor) domain (HisKA) (459-524)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	71.391	100	0.715