Detailed information NTG0526241

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: K6124_RS20045
• Genome accession: NZ_CP082103
• Coordinates: 4138852..4139835 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain MS15046
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4133852..4144835

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6124_RS20025 (K6124_19880)	-	4135484..4135591 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
K6124_RS20030 (K6124_19885)	-	4135967..4136074 (-)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
K6124_RS20035 (K6124_19890)	yhjV	4136550..4137821 (+)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
K6124_RS20040 (K6124_19895)	dppF	4137851..4138855 (-)	1005	WP_000103580.1	dipeptide ABC transporter ATP-binding subunit DppF	-
K6124_RS20045 (K6124_19900)	amiE	4138852..4139835 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
K6124_RS20050 (K6124_19905)	dppC	4139846..4140748 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
K6124_RS20055 (K6124_19910)	dppB	4140758..4141777 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
K6124_RS20060 (K6124_19915)	-	4141795..4142022 (+)	228	WP_000198577.1	hypothetical protein	-
K6124_RS20065 (K6124_19920)	dppA	4142084..4143691 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=526241 K6124_RS20045 WP_001196477.1 4138852..4139835(-) (amiE) [Escherichia coli strain MS15046]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=526241 K6124_RS20045 WP_001196477.1 4138852..4139835(-) (amiE) [Escherichia coli strain MS15046]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404