Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   JJL50_RS16560 Genome accession   NZ_CP067993
Coordinates   3549931..3550332 (-) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas maltophilia strain DHHJ     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3544931..3555332
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JJL50_RS16545 (JJL50_16545) - 3546942..3548978 (-) 2037 WP_032130100.1 methyl-accepting chemotaxis protein -
  JJL50_RS16550 (JJL50_16550) - 3549020..3549550 (-) 531 WP_005410716.1 chemotaxis protein CheW -
  JJL50_RS16555 (JJL50_16555) - 3549550..3549912 (-) 363 WP_005410717.1 response regulator -
  JJL50_RS16560 (JJL50_16560) pilG 3549931..3550332 (-) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  JJL50_RS16565 (JJL50_16565) gshB 3550572..3551519 (+) 948 WP_201117115.1 glutathione synthase -
  JJL50_RS16570 (JJL50_16570) - 3551519..3552403 (+) 885 WP_049422140.1 energy transducer TonB -
  JJL50_RS16575 (JJL50_16575) tsaB 3553066..3553779 (-) 714 WP_201117116.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=526202 JJL50_RS16560 WP_005418455.1 3549931..3550332(-) (pilG) [Stenotrophomonas maltophilia strain DHHJ]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=526202 JJL50_RS16560 WP_005418455.1 3549931..3550332(-) (pilG) [Stenotrophomonas maltophilia strain DHHJ]
ATGACTGAAAACACGACTGCGGGCGGGGAACTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGCTCAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAAGCACTTGCGAAGATCG
CAGACCAGCAACCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGCTACCAGACCTGTGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTCATCATGCTGTCGTCCAAGGATGGCCTGTTCGACAAGGCGCGGGGACGCAT
CGTCGGCTCGGAGCAGTACCTGACGAAGCCTTTCACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677