Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | JJN14_RS09755 | Genome accession | NZ_CP067992 |
| Coordinates | 1982236..1984668 (-) | Length | 810 a.a. |
| NCBI ID | WP_201058551.1 | Uniprot ID | - |
| Organism | Streptococcus mitis strain S022-V7-A3 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1977236..1989668
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJN14_RS09725 (JJN14_09725) | - | 1977576..1978115 (+) | 540 | WP_201058545.1 | cysteine hydrolase family protein | - |
| JJN14_RS09730 (JJN14_09730) | - | 1978185..1978883 (-) | 699 | WP_201058546.1 | hypothetical protein | - |
| JJN14_RS09735 (JJN14_09735) | - | 1979162..1979422 (+) | 261 | WP_201058547.1 | hypothetical protein | - |
| JJN14_RS09740 (JJN14_09740) | - | 1979465..1980238 (-) | 774 | WP_201058548.1 | NUDIX domain-containing protein | - |
| JJN14_RS09745 (JJN14_09745) | pnuC | 1980240..1981019 (-) | 780 | WP_201058549.1 | nicotinamide riboside transporter PnuC | - |
| JJN14_RS09750 (JJN14_09750) | - | 1981029..1982087 (-) | 1059 | WP_201058550.1 | AAA family ATPase | - |
| JJN14_RS09755 (JJN14_09755) | clpC | 1982236..1984668 (-) | 2433 | WP_201058551.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| JJN14_RS09760 (JJN14_09760) | - | 1984670..1985128 (-) | 459 | WP_001211265.1 | CtsR family transcriptional regulator | - |
| JJN14_RS09765 (JJN14_09765) | - | 1985247..1985975 (-) | 729 | WP_201058552.1 | ABC transporter ATP-binding protein | - |
| JJN14_RS09770 (JJN14_09770) | - | 1985975..1986982 (-) | 1008 | WP_042751875.1 | ABC transporter substrate-binding protein | - |
| JJN14_RS09775 (JJN14_09775) | - | 1987021..1987779 (-) | 759 | WP_185756208.1 | ABC transporter permease | - |
| JJN14_RS09780 (JJN14_09780) | - | 1987742..1988032 (-) | 291 | WP_061589694.1 | thiamine-binding protein | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 89963.64 Da Isoelectric Point: 5.8438
>NTDB_id=526184 JJN14_RS09755 WP_201058551.1 1982236..1984668(-) (clpC) [Streptococcus mitis strain S022-V7-A3]
MNYSKALNECIESAYMVAGHFGAGYLESWHLLIAMSNHSYSVAGATLNDYPYEMDRLEEVALELTETDYSQDETFTELPF
SHRLQVLFDEAEYVASVVHAKVLGTEHVLYAILHDGNALATRILERAGFSYEDKKDQVKIAALRRNLEERAGWTREDLKA
LRQRHRTVADKQNSMANMMGMPQTPSGGLEDYTHDLTEQARSGKLEPVIGRDKEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPAEMAKMRVLELDLMNVVAGTRFRGDFEERMNNIIKDVEEDGQVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVTIEEPSVADSMTILQGLKATYEKHHRVQITDEAVET
AVKMAHRYLTSRHLPDSAIDLLDEAAATVQNKAKHVKADDSGLSPADKALMDGKWKQAAQLIAKEEEVPVYKDLVTESDI
LTTLSRLSDIPVQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAK
ALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDD
GVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKGIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSS
DHMQEVVKIMVKPLVASLAEKGIDLKLQASALKLLANQGYDPEMGARPLRRTLQTEVEDKLAELLLKGDLVAGSTLKIGV
KAGQLKFDIA
MNYSKALNECIESAYMVAGHFGAGYLESWHLLIAMSNHSYSVAGATLNDYPYEMDRLEEVALELTETDYSQDETFTELPF
SHRLQVLFDEAEYVASVVHAKVLGTEHVLYAILHDGNALATRILERAGFSYEDKKDQVKIAALRRNLEERAGWTREDLKA
LRQRHRTVADKQNSMANMMGMPQTPSGGLEDYTHDLTEQARSGKLEPVIGRDKEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPAEMAKMRVLELDLMNVVAGTRFRGDFEERMNNIIKDVEEDGQVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVTIEEPSVADSMTILQGLKATYEKHHRVQITDEAVET
AVKMAHRYLTSRHLPDSAIDLLDEAAATVQNKAKHVKADDSGLSPADKALMDGKWKQAAQLIAKEEEVPVYKDLVTESDI
LTTLSRLSDIPVQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAK
ALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDD
GVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKGIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSS
DHMQEVVKIMVKPLVASLAEKGIDLKLQASALKLLANQGYDPEMGARPLRRTLQTEVEDKLAELLLKGDLVAGSTLKIGV
KAGQLKFDIA
Nucleotide
Download Length: 2433 bp
>NTDB_id=526184 JJN14_RS09755 WP_201058551.1 1982236..1984668(-) (clpC) [Streptococcus mitis strain S022-V7-A3]
ATGAACTATTCAAAAGCATTGAATGAATGTATCGAAAGTGCCTACATGGTTGCTGGCCATTTTGGAGCTGGTTACCTAGA
GTCTTGGCACTTGTTGATTGCCATGTCTAATCACAGTTATAGTGTGGCAGGGGCCACTTTAAATGATTATCCATATGAGA
TGGACCGTTTAGAAGAGGTGGCTTTGGAGCTGACTGAAACGGACTATAGTCAGGATGAAACCTTTACGGAATTGCCGTTT
TCTCATCGTTTGCAGGTCCTTTTTGATGAAGCAGAATATGTGGCATCAGTGGTTCATGCTAAGGTGCTAGGGACAGAGCA
TGTCCTCTATGCGATTTTGCATGATGGCAATGCCTTGGCGACTCGTATCTTGGAGAGGGCTGGTTTTTCTTATGAAGACA
AGAAAGACCAGGTTAAGATTGCTGCACTTCGTCGCAATCTAGAAGAACGGGCAGGCTGGACTCGCGAAGACCTTAAAGCT
TTGCGCCAACGCCATCGTACCGTAGCTGATAAGCAAAATTCTATGGCTAATATGATGGGCATGCCCCAGACTCCGAGTGG
TGGTCTCGAGGACTATACGCATGATTTGACAGAGCAAGCGCGTTCTGGAAAGTTAGAACCAGTCATCGGTCGGGATAAGG
AAATCTCGCGTATGATTCAAATCTTGAGCCGTAAAACCAAGAATAATCCTGTCTTGGTTGGGGATGCTGGTGTCGGGAAA
ACAGCCTTGGCGCTTGGTCTTGCCCAGCGTATTGCTAGTGGTGATGTGCCTGCGGAAATGGCTAAGATGCGCGTGTTAGA
GCTTGATTTGATGAATGTCGTTGCAGGGACACGCTTCCGTGGTGACTTTGAAGAGCGCATGAACAATATTATCAAGGATG
TTGAAGAAGATGGCCAAGTGATTCTCTTTATCGACGAACTTCATACCATCATGGGTTCTGGGAGCGGGATTGATTCGACT
CTGGATGCGGCCAATATCTTGAAGCCAGCCTTGGCGCGTGGAACTTTGAGAACGGTTGGTGCGACCACTCAGGAAGAATA
CCAAAAACACATCGAAAAAGATGCGGCCCTTTCTCGTCGATTCGCTAAAGTGACGATTGAAGAACCAAGTGTGGCAGACA
GCATGACCATTTTGCAAGGCTTGAAGGCGACTTATGAGAAGCATCACCGTGTGCAAATCACAGATGAAGCGGTTGAAACA
GCGGTTAAGATGGCTCATCGTTACTTGACGAGTCGTCACTTGCCAGACTCTGCTATCGACCTCTTAGATGAAGCAGCGGC
AACAGTGCAAAATAAGGCTAAGCATGTAAAAGCAGACGATTCAGGTTTGAGTCCAGCTGACAAGGCCTTGATGGATGGTA
AGTGGAAACAGGCAGCTCAGTTAATCGCAAAAGAAGAGGAAGTGCCTGTCTATAAAGACTTGGTGACAGAGTCTGATATT
TTGACCACCTTGAGTCGCTTGTCAGATATTCCAGTCCAAAAACTGACTCAGACTGATGCTAAGAAATACCTAAACTTGGA
AGCTGAATTGCACAAACGTGTCATCGGGCAAGATCAAGCAGTTTCAAGCATTAGCCGTGCGATTCGCCGCAACCAGTCAG
GGATTCGCAGTCATAAGCGTCCGATTGGTTCCTTTATGTTCTTAGGGCCTACAGGTGTCGGTAAGACCGAATTGGCTAAG
GCTCTAGCAGAAGTTCTTTTTGATGATGAATCAGCTCTGATCCGCTTTGATATGAGTGAATATATGGAGAAATTTGCAGC
CAGCCGTCTCAATGGAGCTCCTCCGGGCTATGTGGGGTATGAAGAAGGTGGGGAGTTGACCGAGAAAGTTCGCAACAAAC
CATACTCTGTTCTCCTCTTTGACGAGGTAGAGAAGGCCCATCCAGACATCTTTAATGTTCTCTTGCAGGTTTTAGATGAT
GGTGTCTTGACCGATAGCAAGGGCCGCAAGGTTGACTTTTCAAATACCATTATCATCATGACGTCAAATCTTGGTGCGAC
AGCCCTTCGTGATGACAAGACCGTCGGTTTTGGGGCTAAGGGCATTCGTTTTGACCAGGAGAATATGGAGAAACGCATGT
TCGAAGAGCTGAAAAAGGCTTATAGACCGGAATTCATCAATCGTATTGATGAAAAGGTGGTCTTCCATAGCCTGTCTAGC
GATCATATGCAGGAAGTGGTGAAGATTATGGTTAAACCTTTAGTGGCAAGTTTGGCTGAAAAAGGCATTGACTTGAAATT
ACAAGCTTCAGCCCTGAAATTGTTGGCAAATCAAGGATATGATCCAGAGATGGGAGCTCGTCCACTTCGCAGAACCCTAC
AAACAGAAGTGGAAGACAAGTTAGCAGAACTTCTTCTCAAGGGAGATTTAGTGGCAGGTAGCACACTTAAGATTGGTGTA
AAAGCAGGCCAGTTAAAATTTGATATTGCATAA
ATGAACTATTCAAAAGCATTGAATGAATGTATCGAAAGTGCCTACATGGTTGCTGGCCATTTTGGAGCTGGTTACCTAGA
GTCTTGGCACTTGTTGATTGCCATGTCTAATCACAGTTATAGTGTGGCAGGGGCCACTTTAAATGATTATCCATATGAGA
TGGACCGTTTAGAAGAGGTGGCTTTGGAGCTGACTGAAACGGACTATAGTCAGGATGAAACCTTTACGGAATTGCCGTTT
TCTCATCGTTTGCAGGTCCTTTTTGATGAAGCAGAATATGTGGCATCAGTGGTTCATGCTAAGGTGCTAGGGACAGAGCA
TGTCCTCTATGCGATTTTGCATGATGGCAATGCCTTGGCGACTCGTATCTTGGAGAGGGCTGGTTTTTCTTATGAAGACA
AGAAAGACCAGGTTAAGATTGCTGCACTTCGTCGCAATCTAGAAGAACGGGCAGGCTGGACTCGCGAAGACCTTAAAGCT
TTGCGCCAACGCCATCGTACCGTAGCTGATAAGCAAAATTCTATGGCTAATATGATGGGCATGCCCCAGACTCCGAGTGG
TGGTCTCGAGGACTATACGCATGATTTGACAGAGCAAGCGCGTTCTGGAAAGTTAGAACCAGTCATCGGTCGGGATAAGG
AAATCTCGCGTATGATTCAAATCTTGAGCCGTAAAACCAAGAATAATCCTGTCTTGGTTGGGGATGCTGGTGTCGGGAAA
ACAGCCTTGGCGCTTGGTCTTGCCCAGCGTATTGCTAGTGGTGATGTGCCTGCGGAAATGGCTAAGATGCGCGTGTTAGA
GCTTGATTTGATGAATGTCGTTGCAGGGACACGCTTCCGTGGTGACTTTGAAGAGCGCATGAACAATATTATCAAGGATG
TTGAAGAAGATGGCCAAGTGATTCTCTTTATCGACGAACTTCATACCATCATGGGTTCTGGGAGCGGGATTGATTCGACT
CTGGATGCGGCCAATATCTTGAAGCCAGCCTTGGCGCGTGGAACTTTGAGAACGGTTGGTGCGACCACTCAGGAAGAATA
CCAAAAACACATCGAAAAAGATGCGGCCCTTTCTCGTCGATTCGCTAAAGTGACGATTGAAGAACCAAGTGTGGCAGACA
GCATGACCATTTTGCAAGGCTTGAAGGCGACTTATGAGAAGCATCACCGTGTGCAAATCACAGATGAAGCGGTTGAAACA
GCGGTTAAGATGGCTCATCGTTACTTGACGAGTCGTCACTTGCCAGACTCTGCTATCGACCTCTTAGATGAAGCAGCGGC
AACAGTGCAAAATAAGGCTAAGCATGTAAAAGCAGACGATTCAGGTTTGAGTCCAGCTGACAAGGCCTTGATGGATGGTA
AGTGGAAACAGGCAGCTCAGTTAATCGCAAAAGAAGAGGAAGTGCCTGTCTATAAAGACTTGGTGACAGAGTCTGATATT
TTGACCACCTTGAGTCGCTTGTCAGATATTCCAGTCCAAAAACTGACTCAGACTGATGCTAAGAAATACCTAAACTTGGA
AGCTGAATTGCACAAACGTGTCATCGGGCAAGATCAAGCAGTTTCAAGCATTAGCCGTGCGATTCGCCGCAACCAGTCAG
GGATTCGCAGTCATAAGCGTCCGATTGGTTCCTTTATGTTCTTAGGGCCTACAGGTGTCGGTAAGACCGAATTGGCTAAG
GCTCTAGCAGAAGTTCTTTTTGATGATGAATCAGCTCTGATCCGCTTTGATATGAGTGAATATATGGAGAAATTTGCAGC
CAGCCGTCTCAATGGAGCTCCTCCGGGCTATGTGGGGTATGAAGAAGGTGGGGAGTTGACCGAGAAAGTTCGCAACAAAC
CATACTCTGTTCTCCTCTTTGACGAGGTAGAGAAGGCCCATCCAGACATCTTTAATGTTCTCTTGCAGGTTTTAGATGAT
GGTGTCTTGACCGATAGCAAGGGCCGCAAGGTTGACTTTTCAAATACCATTATCATCATGACGTCAAATCTTGGTGCGAC
AGCCCTTCGTGATGACAAGACCGTCGGTTTTGGGGCTAAGGGCATTCGTTTTGACCAGGAGAATATGGAGAAACGCATGT
TCGAAGAGCTGAAAAAGGCTTATAGACCGGAATTCATCAATCGTATTGATGAAAAGGTGGTCTTCCATAGCCTGTCTAGC
GATCATATGCAGGAAGTGGTGAAGATTATGGTTAAACCTTTAGTGGCAAGTTTGGCTGAAAAAGGCATTGACTTGAAATT
ACAAGCTTCAGCCCTGAAATTGTTGGCAAATCAAGGATATGATCCAGAGATGGGAGCTCGTCCACTTCGCAGAACCCTAC
AAACAGAAGTGGAAGACAAGTTAGCAGAACTTCTTCTCAAGGGAGATTTAGTGGCAGGTAGCACACTTAAGATTGGTGTA
AAAGCAGGCCAGTTAAAATTTGATATTGCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae D39 |
99.012 |
100 |
0.99 |
| clpC | Streptococcus pneumoniae TIGR4 |
99.012 |
100 |
0.99 |
| clpC | Streptococcus pneumoniae Rx1 |
99.012 |
100 |
0.99 |
| clpC | Streptococcus mutans UA159 |
66.79 |
100 |
0.67 |
| clpC | Streptococcus thermophilus LMD-9 |
65.971 |
100 |
0.663 |
| clpC | Streptococcus thermophilus LMG 18311 |
65.848 |
100 |
0.662 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.854 |
100 |
0.5 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
44.87 |
99.877 |
0.448 |
| clpE | Streptococcus mutans UA159 |
49.194 |
76.543 |
0.377 |
| clpE | Streptococcus pneumoniae Rx1 |
47.134 |
77.531 |
0.365 |
| clpE | Streptococcus pneumoniae D39 |
47.134 |
77.531 |
0.365 |
| clpE | Streptococcus pneumoniae R6 |
47.134 |
77.531 |
0.365 |
| clpE | Streptococcus pneumoniae TIGR4 |
47.134 |
77.531 |
0.365 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
46.795 |
77.037 |
0.36 |