Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   JJN14_RS07950 Genome accession   NZ_CP067992
Coordinates   1591847..1592140 (-) Length   97 a.a.
NCBI ID   WP_185776784.1    Uniprot ID   -
Organism   Streptococcus mitis strain S022-V7-A3     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1586847..1597140
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JJN14_RS07940 (JJN14_07940) metF 1588275..1589141 (-) 867 WP_000089967.1 methylenetetrahydrofolate reductase [NAD(P)H] -
  JJN14_RS07945 (JJN14_07945) metE 1589244..1591493 (-) 2250 WP_201058358.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  JJN14_RS07950 (JJN14_07950) HI0659 1591847..1592140 (-) 294 WP_185776784.1 helix-turn-helix domain-containing protein Machinery gene
  JJN14_RS07955 (JJN14_07955) - 1592327..1592692 (-) 366 WP_201058359.1 TIGR02328 family protein -
  JJN14_RS07960 (JJN14_07960) - 1592676..1593080 (-) 405 WP_201058360.1 YbgA family protein -
  JJN14_RS07965 (JJN14_07965) - 1593103..1593372 (-) 270 Protein_1527 HigA family addiction module antitoxin -
  JJN14_RS07970 (JJN14_07970) - 1593447..1594220 (-) 774 WP_236253686.1 hypothetical protein -
  JJN14_RS07975 (JJN14_07975) - 1594210..1595577 (-) 1368 WP_070481875.1 AAA family ATPase -
  JJN14_RS07980 (JJN14_07980) - 1595700..1596902 (-) 1203 WP_201058362.1 restriction endonuclease subunit S -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10707.42 Da        Isoelectric Point: 7.0170

>NTDB_id=526168 JJN14_RS07950 WP_185776784.1 1591847..1592140(-) (HI0659) [Streptococcus mitis strain S022-V7-A3]
MKNSAIGSNWKDVRSELFTKEEILESDMRVAIMSELIEARHEQGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVL
ASLGKTLAVVPLEQKKG

Nucleotide


Download         Length: 294 bp        

>NTDB_id=526168 JJN14_RS07950 WP_185776784.1 1591847..1592140(-) (HI0659) [Streptococcus mitis strain S022-V7-A3]
ATGAAGAATAGTGCCATTGGGAGTAATTGGAAGGATGTCCGGTCTGAACTATTTACCAAGGAGGAAATCCTTGAAAGTGA
TATGCGAGTGGCTATTATGAGTGAGCTGATTGAGGCTAGGCATGAACAAGGAATCAGTCAGAAAAAGCTAGAAGAACTTA
GTGGAGTAAGCCAGCCTGTCATAGCTAGGATGGAAACAGGAAAGACAAGTCCTCAGTTGGACACAGTCTTAAAAGTCCTA
GCTAGTTTAGGAAAGACACTAGCAGTCGTCCCACTTGAACAGAAAAAAGGTTGA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(37-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

57.292

98.969

0.567