Detailed information NTG0526085

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6129_RS22740
• Genome accession: NZ_CP082097
• Coordinates: 4538645..4539670 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MS15052
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4533645..4544670

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6129_RS22710 (K6129_22535)	zapB	4533729..4533974 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
K6129_RS22715 (K6129_22540)	rraA	4534059..4534544 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K6129_RS22720 (K6129_22545)	menA	4534637..4535563 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K6129_RS22725 (K6129_22550)	hslU	4535630..4536961 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
K6129_RS22730 (K6129_22555)	hslV	4536971..4537501 (-)	531	WP_000208235.1	ATP-dependent protease subunit HslV	-
K6129_RS22735 (K6129_22560)	ftsN	4537594..4538553 (-)	960	WP_000068834.1	cell division protein FtsN	-
K6129_RS22740 (K6129_22565)	cytR	4538645..4539670 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
K6129_RS22745 (K6129_22570)	priA	4539826..4542024 (-)	2199	WP_001350873.1	primosomal protein N'	Machinery gene
K6129_RS22750 (K6129_22575)	rpmE	4542227..4542439 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
K6129_RS22755 (K6129_22580)	yiiX	4542500..4543108 (-)	609	WP_000702319.1	YiiX family permuted papain-like enzyme	-
K6129_RS22760 (K6129_22585)	metJ	4543168..4543485 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=526085 K6129_RS22740 WP_000644904.1 4538645..4539670(-) (cytR) [Escherichia coli strain MS15052]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=526085 K6129_RS22740 WP_000644904.1 4538645..4539670(-) (cytR) [Escherichia coli strain MS15052]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCTGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628