Detailed information NTG0526070

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: K6129_RS20685
• Genome accession: NZ_CP082097
• Coordinates: 4109482..4110465 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain MS15052
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4104482..4115465

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6129_RS20660 (K6129_20495)	-	4105632..4105739 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
K6129_RS20665 (K6129_20500)	-	4106115..4106222 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
K6129_RS20670 (K6129_20505)	-	4106597..4106704 (-)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
K6129_RS20675 (K6129_20510)	yhjV	4107180..4108451 (+)	1272	WP_001332306.1	aromatic amino acid transport family protein	-
K6129_RS20680 (K6129_20515)	dppF	4108481..4109485 (-)	1005	WP_000103579.1	dipeptide ABC transporter ATP-binding subunit DppF	-
K6129_RS20685 (K6129_20520)	amiE	4109482..4110465 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
K6129_RS20690 (K6129_20525)	dppC	4110476..4111378 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
K6129_RS20695 (K6129_20530)	dppB	4111388..4112407 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
K6129_RS20700 (K6129_20535)	dppA	4112558..4114165 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=526070 K6129_RS20685 WP_001196477.1 4109482..4110465(-) (amiE) [Escherichia coli strain MS15052]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=526070 K6129_RS20685 WP_001196477.1 4109482..4110465(-) (amiE) [Escherichia coli strain MS15052]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTAAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404