Detailed information NTG0525985

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6135_RS19600
• Genome accession: NZ_CP082094
• Coordinates: 4084224..4085249 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MS15236
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4079224..4090249

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6135_RS19580 (K6135_19420)	metJ	4080409..4080726 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
K6135_RS19585 (K6135_19425)	yiiX	4080786..4081394 (+)	609	WP_000702297.1	YiiX family permuted papain-like enzyme	-
K6135_RS19590 (K6135_19430)	rpmE	4081455..4081667 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
K6135_RS19595 (K6135_19435)	priA	4081870..4084068 (+)	2199	WP_001298416.1	primosomal protein N'	Machinery gene
K6135_RS19600 (K6135_19440)	cytR	4084224..4085249 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
K6135_RS19605 (K6135_19445)	ftsN	4085341..4086300 (+)	960	WP_000068847.1	cell division protein FtsN	-
K6135_RS19610 (K6135_19450)	hslV	4086393..4086923 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
K6135_RS19615 (K6135_19455)	hslU	4086933..4088264 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
K6135_RS19620 (K6135_19460)	menA	4088331..4089257 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K6135_RS19625 (K6135_19465)	rraA	4089350..4089835 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K6135_RS19630 (K6135_19470)	zapB	4089920..4090165 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=525985 K6135_RS19600 WP_000644904.1 4084224..4085249(+) (cytR) [Escherichia coli strain MS15236]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=525985 K6135_RS19600 WP_000644904.1 4084224..4085249(+) (cytR) [Escherichia coli strain MS15236]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628