Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   JJN09_RS21150 Genome accession   NZ_CP067412
Coordinates   4691930..4692334 (-) Length   134 a.a.
NCBI ID   WP_085709083.1    Uniprot ID   -
Organism   Pseudomonas sp. HS6     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4686930..4697334
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JJN09_RS21135 (JJN09_21110) - 4688880..4690940 (-) 2061 WP_249483513.1 methyl-accepting chemotaxis protein -
  JJN09_RS21140 (JJN09_21115) - 4690954..4691493 (-) 540 WP_085731577.1 chemotaxis protein CheW -
  JJN09_RS21145 (JJN09_21120) pilH 4691504..4691869 (-) 366 WP_007953328.1 twitching motility response regulator PilH -
  JJN09_RS21150 (JJN09_21125) pilG 4691930..4692334 (-) 405 WP_085709083.1 twitching motility response regulator PilG Regulator
  JJN09_RS21155 (JJN09_21130) gshB 4692560..4693510 (+) 951 WP_249483515.1 glutathione synthase -
  JJN09_RS21160 (JJN09_21135) - 4693618..4694517 (+) 900 WP_249483517.1 energy transducer TonB -
  JJN09_RS21165 (JJN09_21140) - 4694577..4695149 (+) 573 WP_096817620.1 YqgE/AlgH family protein -
  JJN09_RS21170 (JJN09_21145) ruvX 4695149..4695586 (+) 438 WP_096817618.1 Holliday junction resolvase RuvX -
  JJN09_RS21175 (JJN09_21150) pyrR 4695668..4696171 (+) 504 WP_102619700.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  JJN09_RS21180 (JJN09_21155) - 4696199..4697203 (+) 1005 WP_095164512.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14524.83 Da        Isoelectric Point: 5.7193

>NTDB_id=525940 JJN09_RS21150 WP_085709083.1 4691930..4692334(-) (pilG) [Pseudomonas sp. HS6]
MEQQSSALKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
ATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLDAIAAHVPGFAADLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=525940 JJN09_RS21150 WP_085709083.1 4691930..4692334(-) (pilG) [Pseudomonas sp. HS6]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTGATCGACGACTCGAAAACGATTCGTCGCACCGCCGAGACCCTGTT
GAAAAATGCAGGGTGCGAAGTCATCACGGCGATCGACGGTTTCGACGCCCTGGCGAAGATCGCCGACAACCACCCCGGGA
TCATTTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCCTTCAAG
GCAACGCCGGTGATCATGCTGTCGTCCCGCGACGGGCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCCGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCGACGCAATTGCGGCCCATGTTCCGGGCTTTGCCGCTGATTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

93.284

0.694