Detailed information NTG0525911

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6132_RS22735
• Genome accession: NZ_CP082091
• Coordinates: 4606458..4607483 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644911.1
• Uniprot ID: -
• Organism: Escherichia coli strain MS20645
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4601458..4612483

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6132_RS22710 (K6132_22485)	rraA	4601872..4602357 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K6132_RS22715 (K6132_22490)	menA	4602450..4603376 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K6132_RS22720 (K6132_22495)	hslU	4603443..4604774 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
K6132_RS22725 (K6132_22500)	hslV	4604784..4605314 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
K6132_RS22730 (K6132_22505)	ftsN	4605407..4606366 (-)	960	WP_000068847.1	cell division protein FtsN	-
K6132_RS22735 (K6132_22510)	cytR	4606458..4607483 (-)	1026	WP_000644911.1	DNA-binding transcriptional regulator CytR	Regulator
K6132_RS22740 (K6132_22515)	priA	4607639..4609837 (-)	2199	WP_001540348.1	primosomal protein N'	Machinery gene
K6132_RS22745 (K6132_22520)	rpmE	4610040..4610252 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
K6132_RS22750 (K6132_22525)	yiiX	4610313..4610921 (-)	609	WP_000702298.1	YiiX family permuted papain-like enzyme	-
K6132_RS22755 (K6132_22530)	metJ	4610981..4611298 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37805.71 Da
• Isoelectric Point: 6.1617

>NTDB_id=525911 K6132_RS22735 WP_000644911.1 4606458..4607483(-) (cytR) [Escherichia coli strain MS20645]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHNRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=525911 K6132_RS22735 WP_000644911.1 4606458..4607483(-) (cytR) [Escherichia coli strain MS20645]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAATCGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625