Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   JHW41_RS06140 Genome accession   NZ_CP067396
Coordinates   1426433..1426831 (+) Length   132 a.a.
NCBI ID   WP_057948678.1    Uniprot ID   A0A1T3VI62
Organism   Lysobacter enzymogenes strain CX06     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1421433..1431831
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JHW41_RS06115 (JHW41_06080) tsaB 1421927..1422655 (+) 729 WP_250449355.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  JHW41_RS06120 (JHW41_06085) - 1422735..1423880 (+) 1146 WP_250449356.1 hypothetical protein -
  JHW41_RS06125 (JHW41_06090) - 1423975..1424256 (+) 282 WP_250449357.1 hypothetical protein -
  JHW41_RS06130 (JHW41_06095) - 1424267..1425148 (-) 882 WP_078997594.1 energy transducer TonB -
  JHW41_RS06135 (JHW41_06100) gshB 1425145..1426098 (-) 954 WP_057948679.1 glutathione synthase -
  JHW41_RS06140 (JHW41_06105) pilG 1426433..1426831 (+) 399 WP_057948678.1 twitching motility response regulator PilG Regulator
  JHW41_RS06145 (JHW41_06110) - 1426849..1427214 (+) 366 WP_057948677.1 response regulator -
  JHW41_RS06150 (JHW41_06115) - 1427225..1427764 (+) 540 WP_057950245.1 chemotaxis protein CheW -
  JHW41_RS06155 (JHW41_06120) - 1427820..1429838 (+) 2019 WP_057948676.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14831.25 Da        Isoelectric Point: 7.2451

>NTDB_id=525866 JHW41_RS06140 WP_057948678.1 1426433..1426831(+) (pilG) [Lysobacter enzymogenes strain CX06]
MLDEVRSGSLDGLRVMVIDDSKTIRRTAETLLKREGCEVVTAIDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIKN
NHLFKGTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLDAIRKHVHA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=525866 JHW41_RS06140 WP_057948678.1 1426433..1426831(+) (pilG) [Lysobacter enzymogenes strain CX06]
ATGCTCGACGAGGTTCGTAGCGGCAGCCTCGATGGTCTCAGGGTCATGGTGATCGACGATTCCAAGACCATCCGTCGAAC
CGCCGAGACGCTGTTGAAACGCGAGGGATGCGAGGTGGTCACGGCCATCGACGGATTCGAGGCGTTGGCGAAGATCGCCG
ACCAACAGCCGCAAATCATTTTCGTGGATATCATGATGCCGCGTCTGGACGGCTATCAGACCTGCGCGCTCATCAAGAAC
AATCATCTGTTCAAGGGCACGCCGGTCATCATGCTGTCGTCGAAGGACGGCCTGTTCGACAAGGCGCGGGGCCGCATCGT
CGGTTCCGAGCAATACCTGACCAAGCCATTCACGCGCGAGGAGCTCCTCGACGCGATCCGCAAGCACGTACACGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1T3VI62

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.387

93.939

0.689