Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   JHW38_RS10540 Genome accession   NZ_CP067395
Coordinates   2523671..2524069 (-) Length   132 a.a.
NCBI ID   WP_031372856.1    Uniprot ID   A0AAU8MXI9
Organism   Lysobacter enzymogenes strain CX03     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2518671..2529069
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JHW38_RS10525 (JHW38_10525) - 2520661..2522679 (-) 2019 WP_207525853.1 methyl-accepting chemotaxis protein -
  JHW38_RS10530 (JHW38_10530) - 2522735..2523274 (-) 540 WP_207526332.1 chemotaxis protein CheW -
  JHW38_RS10535 (JHW38_10535) - 2523285..2523650 (-) 366 WP_207525854.1 response regulator -
  JHW38_RS10540 (JHW38_10540) pilG 2523671..2524069 (-) 399 WP_031372856.1 twitching motility response regulator PilG Regulator
  JHW38_RS10545 (JHW38_10545) gshB 2524403..2525365 (+) 963 WP_207525855.1 glutathione synthase -
  JHW38_RS10550 (JHW38_10550) - 2525362..2526246 (+) 885 WP_207525856.1 energy transducer TonB -
  JHW38_RS10555 (JHW38_10555) - 2526433..2527560 (+) 1128 WP_207525857.1 cytochrome c peroxidase -
  JHW38_RS10560 (JHW38_10560) - 2527668..2528096 (-) 429 WP_207525858.1 hypothetical protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14822.24 Da        Isoelectric Point: 7.1364

>NTDB_id=525847 JHW38_RS10540 WP_031372856.1 2523671..2524069(-) (pilG) [Lysobacter enzymogenes strain CX03]
MLDEVRSGSLDGLRVMVIDDSKTIRRTAETLLKREGCEVVTAIDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIKN
NQLFKGTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLDAIRKHVHA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=525847 JHW38_RS10540 WP_031372856.1 2523671..2524069(-) (pilG) [Lysobacter enzymogenes strain CX03]
ATGCTCGACGAGGTTCGTAGCGGCAGCCTCGATGGTCTCAGGGTCATGGTGATCGACGATTCCAAGACCATCCGTCGAAC
CGCCGAGACGCTGTTGAAGCGCGAAGGATGCGAGGTGGTCACGGCCATCGACGGATTCGAAGCGTTGGCCAAGATCGCCG
ACCAACAGCCGCAGATCATTTTCGTGGATATCATGATGCCGCGTCTGGACGGGTATCAGACGTGCGCGCTCATCAAGAAC
AATCAATTGTTCAAGGGCACGCCGGTCATCATGCTGTCGTCCAAGGACGGCCTGTTCGACAAGGCGCGGGGCCGCATCGT
CGGTTCCGAGCAATATCTGACCAAGCCGTTCACGCGCGAGGAGCTCCTCGACGCGATCCGCAAGCACGTACACGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.194

93.939

0.697