Detailed information NTG0525733

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: K6127_RS19565
• Genome accession: NZ_CP082085
• Coordinates: 3990178..3991161 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain MS20653
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3985178..3996161

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6127_RS19540 (K6127_19430)	-	3986328..3986435 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
K6127_RS19545 (K6127_19435)	-	3986811..3986918 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
K6127_RS19550 (K6127_19440)	-	3987293..3987400 (-)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
K6127_RS19555 (K6127_19445)	yhjV	3987876..3989147 (+)	1272	WP_001332306.1	aromatic amino acid transport family protein	-
K6127_RS19560 (K6127_19450)	dppF	3989177..3990181 (-)	1005	WP_000103579.1	dipeptide ABC transporter ATP-binding subunit DppF	-
K6127_RS19565 (K6127_19455)	amiE	3990178..3991161 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
K6127_RS19570 (K6127_19460)	dppC	3991172..3992074 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
K6127_RS19575 (K6127_19465)	dppB	3992084..3993103 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
K6127_RS19580 (K6127_19470)	dppA	3993254..3994861 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=525733 K6127_RS19565 WP_001196477.1 3990178..3991161(-) (amiE) [Escherichia coli strain MS20653]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=525733 K6127_RS19565 WP_001196477.1 3990178..3991161(-) (amiE) [Escherichia coli strain MS20653]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTAAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404