Detailed information NTG0525664

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6133_RS21885
• Genome accession: NZ_CP082083
• Coordinates: 4454162..4455187 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MS20654
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4449162..4460187

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6133_RS21855 (K6133_21740)	zapB	4449246..4449491 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
K6133_RS21860 (K6133_21745)	rraA	4449576..4450061 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K6133_RS21865 (K6133_21750)	menA	4450154..4451080 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K6133_RS21870 (K6133_21755)	hslU	4451147..4452478 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
K6133_RS21875 (K6133_21760)	hslV	4452488..4453018 (-)	531	WP_000208235.1	ATP-dependent protease subunit HslV	-
K6133_RS21880 (K6133_21765)	ftsN	4453111..4454070 (-)	960	WP_000068834.1	cell division protein FtsN	-
K6133_RS21885 (K6133_21770)	cytR	4454162..4455187 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
K6133_RS21890 (K6133_21775)	priA	4455343..4457541 (-)	2199	WP_001350873.1	primosomal protein N'	Machinery gene
K6133_RS21895 (K6133_21780)	rpmE	4457744..4457956 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
K6133_RS21900 (K6133_21785)	yiiX	4458017..4458625 (-)	609	WP_000702319.1	YiiX family permuted papain-like enzyme	-
K6133_RS21905 (K6133_21790)	metJ	4458685..4459002 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=525664 K6133_RS21885 WP_000644904.1 4454162..4455187(-) (cytR) [Escherichia coli strain MS20654]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=525664 K6133_RS21885 WP_000644904.1 4454162..4455187(-) (cytR) [Escherichia coli strain MS20654]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCTGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628