Detailed information NTG0525580

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6137_RS20930
• Genome accession: NZ_CP082080
• Coordinates: 4283448..4284473 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MS20655
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4278448..4289473

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6137_RS20900 (K6137_20770)	zapB	4278532..4278777 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
K6137_RS20905 (K6137_20775)	rraA	4278862..4279347 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K6137_RS20910 (K6137_20780)	menA	4279440..4280366 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K6137_RS20915 (K6137_20785)	hslU	4280433..4281764 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
K6137_RS20920 (K6137_20790)	hslV	4281774..4282304 (-)	531	WP_000208235.1	ATP-dependent protease subunit HslV	-
K6137_RS20925 (K6137_20795)	ftsN	4282397..4283356 (-)	960	WP_000068834.1	cell division protein FtsN	-
K6137_RS20930 (K6137_20800)	cytR	4283448..4284473 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
K6137_RS20935 (K6137_20805)	priA	4284629..4286827 (-)	2199	WP_001350873.1	primosomal protein N'	Machinery gene
K6137_RS20940 (K6137_20810)	rpmE	4287030..4287242 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
K6137_RS20945 (K6137_20815)	yiiX	4287303..4287911 (-)	609	WP_000702319.1	YiiX family permuted papain-like enzyme	-
K6137_RS20950 (K6137_20820)	metJ	4287971..4288288 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=525580 K6137_RS20930 WP_000644904.1 4283448..4284473(-) (cytR) [Escherichia coli strain MS20655]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=525580 K6137_RS20930 WP_000644904.1 4283448..4284473(-) (cytR) [Escherichia coli strain MS20655]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCTGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628