Detailed information NTG0525326

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6140_RS21710
• Genome accession: NZ_CP082073
• Coordinates: 4463828..4464853 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MS20659
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4458828..4469853

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6140_RS21680 (K6140_21505)	zapB	4458912..4459157 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
K6140_RS21685 (K6140_21510)	rraA	4459242..4459727 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K6140_RS21690 (K6140_21515)	menA	4459820..4460746 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K6140_RS21695 (K6140_21520)	hslU	4460813..4462144 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
K6140_RS21700 (K6140_21525)	hslV	4462154..4462684 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
K6140_RS21705 (K6140_21530)	ftsN	4462777..4463736 (-)	960	WP_000068847.1	cell division protein FtsN	-
K6140_RS21710 (K6140_21535)	cytR	4463828..4464853 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
K6140_RS21715 (K6140_21540)	priA	4465009..4467207 (-)	2199	WP_001340148.1	primosomal protein N'	Machinery gene
K6140_RS21720 (K6140_21545)	rpmE	4467410..4467622 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
K6140_RS21725 (K6140_21550)	yiiX	4467683..4468291 (-)	609	WP_000702302.1	YiiX family permuted papain-like enzyme	-
K6140_RS21730 (K6140_21555)	metJ	4468351..4468668 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=525326 K6140_RS21710 WP_000644904.1 4463828..4464853(-) (cytR) [Escherichia coli strain MS20659]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=525326 K6140_RS21710 WP_000644904.1 4463828..4464853(-) (cytR) [Escherichia coli strain MS20659]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628