Detailed information NTG0525311

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: K6140_RS19630
• Genome accession: NZ_CP082073
• Coordinates: 4031530..4032513 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain MS20659
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4026530..4037513

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6140_RS19605 (K6140_19435)	bcsF	4026692..4026883 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
K6140_RS19610 (K6140_19440)	bcsG	4026880..4028559 (+)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
K6140_RS19615 (K6140_19445)	ldrD	4028645..4028752 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
K6140_RS19620 (K6140_19450)	yhjV	4029228..4030499 (+)	1272	WP_001334058.1	aromatic amino acid transport family protein	-
K6140_RS19625 (K6140_19455)	dppF	4030529..4031533 (-)	1005	WP_000103579.1	dipeptide ABC transporter ATP-binding subunit DppF	-
K6140_RS19630 (K6140_19460)	amiE	4031530..4032513 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
K6140_RS19635 (K6140_19465)	dppC	4032524..4033426 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
K6140_RS19640 (K6140_19470)	dppB	4033436..4034455 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
K6140_RS19645 (K6140_19475)	-	4034473..4034700 (+)	228	WP_000198576.1	hypothetical protein	-
K6140_RS19650 (K6140_19480)	dppA	4034762..4036369 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=525311 K6140_RS19630 WP_001196477.1 4031530..4032513(-) (amiE) [Escherichia coli strain MS20659]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=525311 K6140_RS19630 WP_001196477.1 4031530..4032513(-) (amiE) [Escherichia coli strain MS20659]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTAAATCTGGTTGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404