Detailed information NTG0525239

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6136_RS20820
• Genome accession: NZ_CP082067
• Coordinates: 4302640..4303665 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MS20673
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4297640..4308665

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6136_RS20790 (K6136_20660)	zapB	4297724..4297969 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
K6136_RS20795 (K6136_20665)	rraA	4298054..4298539 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K6136_RS20800 (K6136_20670)	menA	4298632..4299558 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K6136_RS20805 (K6136_20675)	hslU	4299625..4300956 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
K6136_RS20810 (K6136_20680)	hslV	4300966..4301496 (-)	531	WP_000208235.1	ATP-dependent protease subunit HslV	-
K6136_RS20815 (K6136_20685)	ftsN	4301589..4302548 (-)	960	WP_000068834.1	cell division protein FtsN	-
K6136_RS20820 (K6136_20690)	cytR	4302640..4303665 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
K6136_RS20825 (K6136_20695)	priA	4303821..4306019 (-)	2199	WP_001350873.1	primosomal protein N'	Machinery gene
K6136_RS20830 (K6136_20700)	rpmE	4306222..4306434 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
K6136_RS20835 (K6136_20705)	yiiX	4306495..4307103 (-)	609	WP_000702319.1	YiiX family permuted papain-like enzyme	-
K6136_RS20840 (K6136_20710)	metJ	4307163..4307480 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=525239 K6136_RS20820 WP_000644904.1 4302640..4303665(-) (cytR) [Escherichia coli strain MS20673]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=525239 K6136_RS20820 WP_000644904.1 4302640..4303665(-) (cytR) [Escherichia coli strain MS20673]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCTGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628