Detailed information NTG0525224

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: K6136_RS18770
• Genome accession: NZ_CP082067
• Coordinates: 3873432..3874415 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain MS20673
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3868432..3879415

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6136_RS18745 (K6136_18625)	-	3869582..3869689 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
K6136_RS18750 (K6136_18630)	-	3870065..3870172 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
K6136_RS18755 (K6136_18635)	-	3870547..3870654 (-)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
K6136_RS18760 (K6136_18640)	yhjV	3871130..3872401 (+)	1272	WP_001332306.1	aromatic amino acid transport family protein	-
K6136_RS18765 (K6136_18645)	dppF	3872431..3873435 (-)	1005	WP_000103579.1	dipeptide ABC transporter ATP-binding subunit DppF	-
K6136_RS18770 (K6136_18650)	amiE	3873432..3874415 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
K6136_RS18775 (K6136_18655)	dppC	3874426..3875328 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
K6136_RS18780 (K6136_18660)	dppB	3875338..3876357 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
K6136_RS18785 (K6136_18665)	dppA	3876508..3878115 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=525224 K6136_RS18770 WP_001196477.1 3873432..3874415(-) (amiE) [Escherichia coli strain MS20673]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=525224 K6136_RS18770 WP_001196477.1 3873432..3874415(-) (amiE) [Escherichia coli strain MS20673]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTAAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404