Detailed information NTG0525151

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6130_RS21400
• Genome accession: NZ_CP082062
• Coordinates: 4414608..4415633 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644911.1
• Uniprot ID: -
• Organism: Escherichia coli strain MS20674
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4409608..4420633

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6130_RS21370 (K6130_21205)	zapB	4409692..4409937 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
K6130_RS21375 (K6130_21210)	rraA	4410022..4410507 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K6130_RS21380 (K6130_21215)	menA	4410600..4411526 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K6130_RS21385 (K6130_21220)	hslU	4411593..4412924 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
K6130_RS21390 (K6130_21225)	hslV	4412934..4413464 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
K6130_RS21395 (K6130_21230)	ftsN	4413557..4414516 (-)	960	WP_000068847.1	cell division protein FtsN	-
K6130_RS21400 (K6130_21235)	cytR	4414608..4415633 (-)	1026	WP_000644911.1	DNA-binding transcriptional regulator CytR	Regulator
K6130_RS21405 (K6130_21240)	priA	4415789..4417987 (-)	2199	WP_001540348.1	primosomal protein N'	Machinery gene
K6130_RS21410 (K6130_21245)	rpmE	4418190..4418402 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
K6130_RS21415 (K6130_21250)	yiiX	4418463..4419071 (-)	609	WP_000702298.1	YiiX family permuted papain-like enzyme	-
K6130_RS21420 (K6130_21255)	metJ	4419131..4419448 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37805.71 Da
• Isoelectric Point: 6.1617

>NTDB_id=525151 K6130_RS21400 WP_000644911.1 4414608..4415633(-) (cytR) [Escherichia coli strain MS20674]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHNRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=525151 K6130_RS21400 WP_000644911.1 4414608..4415633(-) (cytR) [Escherichia coli strain MS20674]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAATCGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625