Detailed information NTG0525136

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: K6130_RS19050
• Genome accession: NZ_CP082062
• Coordinates: 3927380..3928363 (-)
• Length: 327 a.a.
• NCBI ID: WP_001540025.1
• Uniprot ID: -
• Organism: Escherichia coli strain MS20674
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3922380..3933363

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6130_RS19025 (K6130_18880)	bcsF	3922541..3922732 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
K6130_RS19030 (K6130_18885)	bcsG	3922729..3924408 (+)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
K6130_RS19035 (K6130_18890)	ldrD	3924495..3924602 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
K6130_RS19040 (K6130_18895)	yhjV	3925078..3926349 (+)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
K6130_RS19045 (K6130_18900)	dppF	3926379..3927383 (-)	1005	WP_000103577.1	dipeptide ABC transporter ATP-binding subunit DppF	-
K6130_RS19050 (K6130_18905)	amiE	3927380..3928363 (-)	984	WP_001540025.1	dipeptide ABC transporter ATP-binding protein	Regulator
K6130_RS19055 (K6130_18910)	dppC	3928374..3929276 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
K6130_RS19060 (K6130_18915)	dppB	3929286..3930305 (-)	1020	WP_001540029.1	dipeptide ABC transporter permease DppB	-
K6130_RS19065 (K6130_18920)	dppA	3930612..3932219 (-)	1608	WP_001774075.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35792.37 Da
• Isoelectric Point: 6.4944

>NTDB_id=525136 K6130_RS19050 WP_001540025.1 3927380..3928363(-) (amiE) [Escherichia coli strain MS20674]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFQAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=525136 K6130_RS19050 WP_001540025.1 3927380..3928363(-) (amiE) [Escherichia coli strain MS20674]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATCCAGGCGCAAATCATCGAACTGCTGCTGGAGTTGCAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCAGGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404