Detailed information NTG0525067

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6138_RS22125
• Genome accession: NZ_CP082056
• Coordinates: 4518438..4519463 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MS20675
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4513438..4524463

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6138_RS22100 (K6138_21945)	rraA	4513852..4514337 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K6138_RS22105 (K6138_21950)	menA	4514430..4515356 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K6138_RS22110 (K6138_21955)	hslU	4515423..4516754 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
K6138_RS22115 (K6138_21960)	hslV	4516764..4517294 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
K6138_RS22120 (K6138_21965)	ftsN	4517387..4518346 (-)	960	WP_000068844.1	cell division protein FtsN	-
K6138_RS22125 (K6138_21970)	cytR	4518438..4519463 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
K6138_RS22130 (K6138_21975)	priA	4519619..4521817 (-)	2199	WP_001309891.1	primosomal protein N'	Machinery gene
K6138_RS22135 (K6138_21980)	rpmE	4522020..4522232 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
K6138_RS22140 (K6138_21985)	yiiX	4522293..4522901 (-)	609	WP_000702318.1	YiiX family permuted papain-like enzyme	-
K6138_RS22145 (K6138_21990)	metJ	4522961..4523278 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=525067 K6138_RS22125 WP_000644904.1 4518438..4519463(-) (cytR) [Escherichia coli strain MS20675]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=525067 K6138_RS22125 WP_000644904.1 4518438..4519463(-) (cytR) [Escherichia coli strain MS20675]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGACGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628