Detailed information NTG0525053

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: K6138_RS20055
• Genome accession: NZ_CP082056
• Coordinates: 4070589..4071572 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain MS20675
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4065589..4076572

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6138_RS20035 (K6138_19895)	-	4067221..4067328 (-)	108	WP_000170736.1	type I toxin-antitoxin system toxin Ldr family protein	-
K6138_RS20040 (K6138_19900)	-	4067704..4067811 (-)	108	WP_000170743.1	type I toxin-antitoxin system toxin Ldr family protein	-
K6138_RS20045 (K6138_19905)	yhjV	4068287..4069558 (+)	1272	WP_001309838.1	aromatic amino acid transport family protein	-
K6138_RS20050 (K6138_19910)	dppF	4069588..4070592 (-)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
K6138_RS20055 (K6138_19915)	amiE	4070589..4071572 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
K6138_RS20060 (K6138_19920)	dppC	4071583..4072485 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
K6138_RS20065 (K6138_19925)	dppB	4072495..4073514 (-)	1020	WP_000938865.1	dipeptide ABC transporter permease DppB	-
K6138_RS20070 (K6138_19930)	dppA	4073665..4075272 (-)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=525053 K6138_RS20055 WP_001196486.1 4070589..4071572(-) (amiE) [Escherichia coli strain MS20675]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=525053 K6138_RS20055 WP_001196486.1 4070589..4071572(-) (amiE) [Escherichia coli strain MS20675]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAGCTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATTGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404