Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   JIO00_RS27675 Genome accession   NZ_CP067098
Coordinates   6100501..6100905 (-) Length   134 a.a.
NCBI ID   WP_010466861.1    Uniprot ID   -
Organism   Pseudomonas sp. SW-3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6095501..6105905
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JIO00_RS27660 (JIO00_27660) - 6097323..6099380 (-) 2058 WP_010466865.1 methyl-accepting chemotaxis protein -
  JIO00_RS27665 (JIO00_27665) - 6099528..6100067 (-) 540 WP_010466863.1 chemotaxis protein CheW -
  JIO00_RS27670 (JIO00_27670) pilH 6100078..6100443 (-) 366 WP_027926574.1 twitching motility response regulator PilH -
  JIO00_RS27675 (JIO00_27675) pilG 6100501..6100905 (-) 405 WP_010466861.1 twitching motility response regulator PilG Regulator
  JIO00_RS27680 (JIO00_27680) gshB 6101141..6102112 (+) 972 WP_200667242.1 glutathione synthase -
  JIO00_RS27685 (JIO00_27685) - 6102219..6103118 (+) 900 WP_083375545.1 energy transducer TonB -
  JIO00_RS27690 (JIO00_27690) - 6103334..6103906 (+) 573 WP_077747229.1 YqgE/AlgH family protein -
  JIO00_RS27695 (JIO00_27695) ruvX 6103906..6104343 (+) 438 WP_005792259.1 Holliday junction resolvase RuvX -
  JIO00_RS27700 (JIO00_27700) pyrR 6104424..6104927 (+) 504 WP_010466851.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14613.03 Da        Isoelectric Point: 7.3230

>NTDB_id=525038 JIO00_RS27675 WP_010466861.1 6100501..6100905(-) (pilG) [Pseudomonas sp. SW-3]
MEQHSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNHSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=525038 JIO00_RS27675 WP_010466861.1 6100501..6100905(-) (pilG) [Pseudomonas sp. SW-3]
ATGGAACAGCATTCCAGCGCCTTGAAGGTCATGGTGATCGACGATTCGAAGACGATTCGTCGTACCGCCGAAACGCTGTT
GAAAAACGTGGGTTGTGAAGTCATCACGGCCATCGATGGTTTCGATGCCCTGGCCAAGATTGCCGATAACCATCCCGGCA
TCATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCGTTGATCAAGAACCACAGTGCGTTCAAG
TCCACGCCAGTGATTATGCTGTCGTCCAAGGACGGGCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAACGCGATCCAGGCCCATGTACCGGGCTTCGCCGCCGTTTTGCCGC
AGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

93.284

0.709