Detailed information NTG0524896

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6131_RS20815
• Genome accession: NZ_CP082047
• Coordinates: 4285664..4286689 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644911.1
• Uniprot ID: -
• Organism: Escherichia coli strain MS21199
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4280664..4291689

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6131_RS20785 (K6131_20635)	zapB	4280748..4280993 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
K6131_RS20790 (K6131_20640)	rraA	4281078..4281563 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K6131_RS20795 (K6131_20645)	menA	4281656..4282582 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K6131_RS20800 (K6131_20650)	hslU	4282649..4283980 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
K6131_RS20805 (K6131_20655)	hslV	4283990..4284520 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
K6131_RS20810 (K6131_20660)	ftsN	4284613..4285572 (-)	960	WP_000068847.1	cell division protein FtsN	-
K6131_RS20815 (K6131_20665)	cytR	4285664..4286689 (-)	1026	WP_000644911.1	DNA-binding transcriptional regulator CytR	Regulator
K6131_RS20820 (K6131_20670)	priA	4286845..4289043 (-)	2199	WP_001540348.1	primosomal protein N'	Machinery gene
K6131_RS20825 (K6131_20675)	rpmE	4289246..4289458 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
K6131_RS20830 (K6131_20680)	yiiX	4289519..4290127 (-)	609	WP_000702298.1	YiiX family permuted papain-like enzyme	-
K6131_RS20835 (K6131_20685)	metJ	4290187..4290504 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37805.71 Da
• Isoelectric Point: 6.1617

>NTDB_id=524896 K6131_RS20815 WP_000644911.1 4285664..4286689(-) (cytR) [Escherichia coli strain MS21199]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHNRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=524896 K6131_RS20815 WP_000644911.1 4285664..4286689(-) (cytR) [Escherichia coli strain MS21199]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAATCGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625