Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   JCR32_RS19820 Genome accession   NZ_CP067069
Coordinates   3874565..3875359 (-) Length   264 a.a.
NCBI ID   WP_014297988.1    Uniprot ID   A0A1J9YJW5
Organism   Bacillus sp. HNR-4     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3869565..3880359
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JCR32_RS19795 (JCR32_19700) yqiS 3869801..3870700 (-) 900 WP_274430243.1 phosphate butyryltransferase -
  JCR32_RS19800 (JCR32_19705) - 3870896..3872968 (-) 2073 WP_274430244.1 sigma-54-dependent Fis family transcriptional regulator -
  JCR32_RS19805 (JCR32_19710) - 3873105..3873338 (+) 234 WP_001190187.1 DUF2627 domain-containing protein -
  JCR32_RS19810 (JCR32_19715) - 3873387..3874115 (-) 729 WP_000172561.1 glycerophosphodiester phosphodiesterase -
  JCR32_RS19815 (JCR32_19720) - 3874166..3874312 (+) 147 WP_001247671.1 YycC family protein -
  JCR32_RS19820 (JCR32_19725) spo0A 3874565..3875359 (-) 795 WP_014297988.1 sporulation transcription factor Spo0A Regulator
  JCR32_RS19825 (JCR32_19730) spoIVB 3875647..3876945 (-) 1299 WP_002028467.1 SpoIVB peptidase -
  JCR32_RS19830 (JCR32_19735) recN 3877064..3878803 (-) 1740 WP_274430245.1 DNA repair protein RecN Machinery gene
  JCR32_RS19835 (JCR32_19740) argR 3879070..3879519 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29454.20 Da        Isoelectric Point: 7.4719

>NTDB_id=524814 JCR32_RS19820 WP_014297988.1 3874565..3875359(-) (spo0A) [Bacillus sp. HNR-4]
MEKIKVCLVDDNKELVSMLESYVAAQEDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=524814 JCR32_RS19820 WP_014297988.1 3874565..3875359(-) (spo0A) [Bacillus sp. HNR-4]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
GGATATGGAAGTAATTGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTTG
TATTAGATATTATTATGCCACATTTAGATGGGTTAGCTGTACTAGAGAAAATGCGCCATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCGTTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCGTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAAGCGAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGATGCAAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTACATGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGACATCGAATTACT
GGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGTGTCGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATCGATTCTATTTCGTCCTTATTCGGTTATACAGTATCTATGTCA
AAAGCAAAACCTACGAATTCCGAGTTCATCGCAATGGTTGCGGATAAGCTTAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1J9YJW5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

81.273

100

0.822