Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   JCR32_RS06025 Genome accession   NZ_CP067069
Coordinates   1190231..1190407 (+) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus sp. HNR-4     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1185231..1195407
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JCR32_RS06005 (JCR32_06000) clpB 1185567..1188167 (+) 2601 WP_000365416.1 ATP-dependent chaperone ClpB -
  JCR32_RS06010 (JCR32_06005) - 1188201..1188383 (-) 183 WP_001211116.1 YjzD family protein -
  JCR32_RS06015 (JCR32_06010) - 1188541..1189275 (+) 735 WP_000028702.1 hydrolase -
  JCR32_RS06020 (JCR32_06015) - 1189305..1190177 (+) 873 WP_274430991.1 NAD(P)-dependent oxidoreductase -
  JCR32_RS06025 (JCR32_06020) comZ 1190231..1190407 (+) 177 WP_009879752.1 ComZ family protein Regulator
  JCR32_RS06030 (JCR32_06025) fabH 1190791..1191723 (+) 933 WP_001100539.1 beta-ketoacyl-ACP synthase III -
  JCR32_RS06035 (JCR32_06030) fabF 1191755..1192993 (+) 1239 WP_000412652.1 beta-ketoacyl-ACP synthase II -
  JCR32_RS06040 (JCR32_06035) - 1193100..1193888 (+) 789 WP_071737212.1 DUF2268 domain-containing putative Zn-dependent protease -
  JCR32_RS06045 (JCR32_06040) - 1194032..1194778 (+) 747 WP_274430992.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=524797 JCR32_RS06025 WP_009879752.1 1190231..1190407(+) (comZ) [Bacillus sp. HNR-4]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=524797 JCR32_RS06025 WP_009879752.1 1190231..1190407(+) (comZ) [Bacillus sp. HNR-4]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAAGCTCAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586