Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   JHX84_RS00140 Genome accession   NZ_CP067043
Coordinates   25943..26896 (-) Length   317 a.a.
NCBI ID   WP_044053096.1    Uniprot ID   -
Organism   Bacillus velezensis strain 19573-3     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 20943..31896
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JHX84_RS00110 (JHX84_00110) - 21095..22081 (-) 987 WP_048367994.1 ABC transporter ATP-binding protein -
  JHX84_RS00115 (JHX84_00115) - 22255..23040 (-) 786 WP_012117278.1 DUF2268 domain-containing protein -
  JHX84_RS00120 (JHX84_00120) fabF 23124..24362 (-) 1239 WP_003155056.1 beta-ketoacyl-ACP synthase II -
  JHX84_RS00125 (JHX84_00125) - 24385..25323 (-) 939 WP_003155057.1 beta-ketoacyl-ACP synthase III -
  JHX84_RS00130 (JHX84_00130) - 25491..25709 (+) 219 WP_044053097.1 hypothetical protein -
  JHX84_RS00135 (JHX84_00135) comZ 25739..25930 (-) 192 WP_003155061.1 ComZ family protein Regulator
  JHX84_RS00140 (JHX84_00140) med 25943..26896 (-) 954 WP_044053096.1 BMP family ABC transporter substrate-binding protein Regulator
  JHX84_RS00145 (JHX84_00145) - 26986..27552 (-) 567 WP_161503320.1 hypothetical protein -
  JHX84_RS00150 (JHX84_00150) - 27635..28369 (-) 735 WP_014304780.1 hypothetical protein -
  JHX84_RS00155 (JHX84_00155) - 28630..28815 (+) 186 WP_003155069.1 YjzD family protein -
  JHX84_RS00160 (JHX84_00160) - 28851..29030 (-) 180 WP_003155070.1 YjzC family protein -
  JHX84_RS00165 (JHX84_00165) argF 29106..30077 (-) 972 WP_115996244.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35375.97 Da        Isoelectric Point: 4.5594

>NTDB_id=524604 JHX84_RS00140 WP_044053096.1 25943..26896(-) (med) [Bacillus velezensis strain 19573-3]
MITRLVMIFSVLLLLSGCTQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKTIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHDFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNQTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=524604 JHX84_RS00140 WP_044053096.1 25943..26896(-) (med) [Bacillus velezensis strain 19573-3]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCACACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTCCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAACGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCACCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAACCAATGAGGTCGGTGTCATCGCCTCTTTTCTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACGACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCGCTGGTGGACA
AAGCGTTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAATCAAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.233

100

0.782