Detailed information NTG0524562

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: K6T47_RS04155
• Genome accession: NZ_CP081931
• Coordinates: 899231..900334 (-)
• Length: 367 a.a.
• NCBI ID: WP_004918085.1
• Uniprot ID: E4TBU2
• Organism: Riemerella anatipestifer strain 20200501E2-1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 894231..905334

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6T47_RS04125 (K6T47_04125)	-	895198..895338 (+)	141	WP_015345427.1	hypothetical protein	-
K6T47_RS04130 (K6T47_04130)	comF	895426..896079 (-)	654	WP_004918078.1	ComF family protein	Machinery gene
K6T47_RS04140 (K6T47_04140)	-	896301..896852 (-)	552	WP_004918080.1	hypothetical protein	-
K6T47_RS04145 (K6T47_04145)	-	896907..897557 (-)	651	WP_004918082.1	HD domain-containing protein	-
K6T47_RS04150 (K6T47_04150)	gdhA	897689..899047 (-)	1359	WP_014938006.1	NADP-specific glutamate dehydrogenase	-
K6T47_RS04155 (K6T47_04155)	dprA	899231..900334 (-)	1104	WP_004918085.1	DNA-processing protein DprA	Machinery gene
K6T47_RS04160 (K6T47_04160)	-	900337..900714 (-)	378	WP_004918086.1	group III truncated hemoglobin	-
K6T47_RS04165 (K6T47_04165)	ruvC	900725..901279 (-)	555	WP_004918088.1	crossover junction endodeoxyribonuclease RuvC	-
K6T47_RS04170 (K6T47_04170)	-	901303..902493 (-)	1191	WP_004918090.1	carboxypeptidase-like regulatory domain-containing protein	-
K6T47_RS04175 (K6T47_04175)	-	902523..902996 (-)	474	WP_004918092.1	Lrp/AsnC family transcriptional regulator	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40491.51 Da
• Isoelectric Point: 6.6968

>NTDB_id=524562 K6T47_RS04155 WP_004918085.1 899231..900334(-) (dprA) [Riemerella anatipestifer strain 20200501E2-1]
MVNAEEILYSIALRRSPLVGDVIFASLVSEVGSAKEAWGLSKLELRKISGVGKQIASNIGDKNLLKFAEKEIEFCIKNEI
KIHLRHLNQLPRLLGECYDAPAILFQKGDYEDTANNISIVGTRNATAYGKSFLEDLIVQFKNKNIQVISGLALGTDGIAH
QEALKNNIKTSAVLAHGLHIIYPSKHKILAEEILNNGGALFSEFCSDEKPDREHFLQRNRIVAGLSANTIVVESAYAGGS
ISTASFANQYNREVYALAGRLTDKYSQGCNHLIFQNKAKIISSIKGLLKDLDLDNTSKVLELFPSVEVSLTPVQEPVYDI
IKEVNDISLDDLSEKLNQPISKVFPVLLELELLGLIRANSGRRYSII

Nucleotide

• Length: 1104 bp

>NTDB_id=524562 K6T47_RS04155 WP_004918085.1 899231..900334(-) (dprA) [Riemerella anatipestifer strain 20200501E2-1]
ATGGTAAATGCGGAAGAAATTTTATATTCTATTGCTCTTCGGCGAAGCCCATTGGTGGGAGATGTTATATTTGCAAGTTT
GGTTAGCGAGGTAGGCTCTGCTAAGGAAGCGTGGGGTCTGTCTAAGTTGGAATTACGGAAAATATCAGGCGTAGGTAAGC
AAATTGCCTCAAACATCGGAGATAAAAATCTTTTAAAATTTGCTGAAAAGGAAATAGAGTTCTGCATTAAAAACGAAATA
AAAATCCACTTACGACATCTTAATCAGCTTCCTCGTCTTTTAGGTGAATGTTATGATGCTCCTGCTATTCTTTTTCAAAA
AGGAGATTATGAGGATACCGCTAATAATATTAGTATTGTTGGGACGAGAAATGCCACTGCTTATGGTAAGTCGTTTTTGG
AGGATTTAATTGTTCAGTTTAAAAATAAAAATATTCAAGTCATTAGTGGTTTAGCTTTAGGTACAGACGGAATAGCTCAT
CAAGAGGCTTTAAAAAACAATATAAAAACTTCAGCGGTTTTAGCACACGGTTTACATATCATTTATCCGTCCAAACATAA
AATTCTCGCTGAAGAAATATTAAATAATGGTGGAGCTTTGTTTTCTGAATTCTGCTCTGATGAAAAGCCAGATAGAGAAC
ATTTTTTGCAAAGAAATCGTATTGTGGCAGGGCTTTCGGCTAATACGATTGTGGTAGAGTCTGCTTATGCAGGAGGCTCT
ATTAGCACGGCGAGTTTTGCTAATCAGTATAATAGAGAAGTGTATGCTTTGGCAGGGCGTCTTACAGATAAATATAGCCA
AGGTTGCAATCATCTTATTTTTCAAAATAAAGCTAAAATCATATCTTCTATTAAAGGTTTGCTAAAAGACCTAGATTTGG
ATAATACTTCTAAAGTTTTGGAGCTTTTTCCTTCAGTTGAAGTTTCTTTAACTCCTGTTCAGGAGCCTGTTTATGATATT
ATTAAGGAGGTTAATGATATTTCATTAGATGACTTGTCAGAAAAATTAAATCAACCCATATCTAAAGTGTTTCCTGTTTT
ATTGGAATTAGAATTATTGGGGTTGATAAGGGCAAATTCTGGGAGGAGATATTCTATCATTTAG

Domains

Predicted by InterProScan.

• DNA recombination-mediator protein A (DNA_processg_A) (77-281)

• DprA winged helix domain (WHD_DprA) (309-361)

3D structure

• AlphaFold DB: E4TBU2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	100	100	1