Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   JHZ65_RS24815 Genome accession   NZ_CP067024
Coordinates   5552364..5552774 (-) Length   136 a.a.
NCBI ID   WP_002551738.1    Uniprot ID   A0AAT9SFQ2
Organism   Pseudomonas syringae pv. maculicola strain MAFF 302723     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5547364..5557774
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JHZ65_RS24800 (JHZ65_24805) - 5549323..5551365 (-) 2043 WP_005621029.1 methyl-accepting chemotaxis protein -
  JHZ65_RS24805 (JHZ65_24810) - 5551398..5551937 (-) 540 WP_005769411.1 chemotaxis protein CheW -
  JHZ65_RS24810 (JHZ65_24815) pilH 5551952..5552317 (-) 366 WP_003377196.1 twitching motility response regulator PilH -
  JHZ65_RS24815 (JHZ65_24820) pilG 5552364..5552774 (-) 411 WP_002551738.1 twitching motility response regulator PilG Regulator
  JHZ65_RS24820 (JHZ65_24825) gshB 5553019..5553978 (+) 960 WP_003377199.1 glutathione synthase -
  JHZ65_RS24825 (JHZ65_24830) - 5554228..5555130 (+) 903 WP_005769415.1 energy transducer TonB -
  JHZ65_RS24830 (JHZ65_24835) - 5555206..5555778 (+) 573 WP_005769417.1 YqgE/AlgH family protein -
  JHZ65_RS24835 (JHZ65_24840) ruvX 5555778..5556218 (+) 441 WP_003377205.1 Holliday junction resolvase RuvX -
  JHZ65_RS24840 (JHZ65_24845) pyrR 5556317..5556829 (+) 513 WP_005769419.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14943.42 Da        Isoelectric Point: 8.5283

>NTDB_id=524544 JHZ65_RS24815 WP_002551738.1 5552364..5552774(-) (pilG) [Pseudomonas syringae pv. maculicola strain MAFF 302723]
MEQHASALKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIKAHVPGFVAAEQHIS

Nucleotide


Download         Length: 411 bp        

>NTDB_id=524544 JHZ65_RS24815 WP_002551738.1 5552364..5552774(-) (pilG) [Pseudomonas syringae pv. maculicola strain MAFF 302723]
ATGGAACAACACGCCTCTGCATTGAAAGTCATGGTCATCGATGACTCGAAGACCATCCGCCGCACCGCCGAAACGCTGCT
TAAAAACGCAGGTTGCGAAGTCATCACTGCGATAGACGGTTTTGACGCGCTGGCCAAGATTGCCGATAACCACCCGCGAA
TCATATTCGTCGATATCATGATGCCGCGCCTGGATGGCTATCAGACGTGCGCGCTGATCAAGAACAACCGTGCATTCAAG
TCCACGCCGGTCATTATGCTGTCCTCCAAGGACGGTCTGTTTGACAAGGCCAAGGGGCGAATCGTCGGTTCCGATCAGTT
TTTGACAAAGCCTTTCAGCAAGGAAGAACTGCTCAGCGCGATCAAGGCTCATGTGCCGGGCTTCGTTGCAGCAGAACAAC
ACATATCGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

91.912

0.691