Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   JGS08_RS24040 Genome accession   NZ_CP067022
Coordinates   5402807..5403217 (-) Length   136 a.a.
NCBI ID   WP_007252030.1    Uniprot ID   -
Organism   Pseudomonas cannabina pv. alisalensis strain MAFF 301419     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5397807..5408217
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JGS08_RS24025 (JGS08_24025) - 5399753..5401795 (-) 2043 WP_007252027.1 methyl-accepting chemotaxis protein -
  JGS08_RS24030 (JGS08_24030) - 5401841..5402380 (-) 540 WP_007252028.1 chemotaxis protein CheW -
  JGS08_RS24035 (JGS08_24035) pilH 5402395..5402760 (-) 366 WP_007252029.1 twitching motility response regulator PilH -
  JGS08_RS24040 (JGS08_24040) pilG 5402807..5403217 (-) 411 WP_007252030.1 twitching motility response regulator PilG Regulator
  JGS08_RS24045 (JGS08_24045) gshB 5403463..5404422 (+) 960 WP_007252031.1 glutathione synthase -
  JGS08_RS24050 (JGS08_24050) - 5404989..5405891 (+) 903 WP_007252032.1 energy transducer TonB -
  JGS08_RS24055 (JGS08_24055) - 5405967..5406539 (+) 573 WP_007252033.1 YqgE/AlgH family protein -
  JGS08_RS24060 (JGS08_24060) ruvX 5406539..5406979 (+) 441 WP_007252034.1 Holliday junction resolvase RuvX -
  JGS08_RS24065 (JGS08_24065) pyrR 5407078..5407590 (+) 513 WP_007252035.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14998.46 Da        Isoelectric Point: 8.5316

>NTDB_id=524517 JGS08_RS24040 WP_007252030.1 5402807..5403217(-) (pilG) [Pseudomonas cannabina pv. alisalensis strain MAFF 301419]
MEQHASALKVMVIDDSKTIRRTAETLLRNAGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFNKEELLSAIKAHVPGFVAAEQHLS

Nucleotide


Download         Length: 411 bp        

>NTDB_id=524517 JGS08_RS24040 WP_007252030.1 5402807..5403217(-) (pilG) [Pseudomonas cannabina pv. alisalensis strain MAFF 301419]
ATGGAACAACACGCCTCCGCCTTGAAAGTCATGGTCATCGATGACTCGAAGACCATCCGCCGCACCGCCGAAACGCTGCT
CAGAAACGCAGGCTGCGAAGTCATCACTGCGATAGACGGTTTCGACGCGCTGGCCAAGATTGCCGATAACCACCCGCGAA
TCATATTCGTCGATATCATGATGCCGCGTCTGGACGGCTATCAGACCTGCGCGCTGATCAAGAACAACCGGGCATTCAAG
TCGACGCCGGTCATCATGCTGTCGTCAAAGGACGGGCTGTTCGACAAGGCCAAGGGTCGGATTGTCGGTTCCGATCAGTT
TTTGACCAAGCCTTTCAACAAGGAAGAACTGCTCAGCGCCATCAAGGCTCATGTGCCGGGTTTCGTTGCAGCAGAACAAC
ATCTATCGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

91.912

0.684