Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   JFY49_RS01855 Genome accession   NZ_CP067019
Coordinates   407776..409998 (-) Length   740 a.a.
NCBI ID   WP_086195243.1    Uniprot ID   A0A241VE60
Organism   Acinetobacter sp. CS-2     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 402776..414998
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JFY49_RS01835 (JFY49_01835) - 403377..403838 (-) 462 WP_086195239.1 DUF2147 domain-containing protein -
  JFY49_RS01840 (JFY49_01840) - 404268..404708 (-) 441 WP_227609520.1 DUF2147 domain-containing protein -
  JFY49_RS01845 (JFY49_01845) - 404949..405824 (-) 876 WP_086195241.1 Hsp33 family molecular chaperone HslO -
  JFY49_RS01850 (JFY49_01850) - 405875..407716 (-) 1842 WP_086195242.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  JFY49_RS01855 (JFY49_01855) priA 407776..409998 (-) 2223 WP_086195243.1 primosomal protein N' Machinery gene
  JFY49_RS01860 (JFY49_01860) gspF 410151..411356 (+) 1206 WP_086195244.1 type II secretion system inner membrane protein GspF -
  JFY49_RS01865 (JFY49_01865) gspG 411402..411839 (+) 438 WP_086195245.1 type II secretion system major pseudopilin GspG -
  JFY49_RS01870 (JFY49_01870) - 412120..412455 (+) 336 WP_086195246.1 hypothetical protein -
  JFY49_RS01875 (JFY49_01875) lnt 412621..414180 (-) 1560 WP_086195247.1 apolipoprotein N-acyltransferase -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 84208.28 Da        Isoelectric Point: 8.8627

>NTDB_id=524462 JFY49_RS01855 WP_086195243.1 407776..409998(-) (priA) [Acinetobacter sp. CS-2]
MPNTPPTPADIYRIRVAVPVHLYDCFDYTLTAEQYQQAEVGARVAVSFGRQNLVGIIVEKLTADTPIDPHFKLKAITELL
DEQALLDQKILSLLTWSAQYYQFPIGEVFQSALPTFLRQGKPYNLLARMWKVLDLHAEDKLMRSEKQQQAYKVLKLHPQG
TTENILNLAGIETATLKALEKKAIVQCILEHQDFSPQPVTLAQMPLTANEDQKKAIQQVLKAQKKYQAFLLDGLTGSGKT
EVYLQIMQEVLKQGKQVLVLVPEIGLTPQTISRFQSRFHGNIVLLHSGLNDSKRLQAWQAAQTGKASIILGTRSTIYTPL
PNLGLIILDEEHDLSFKQQEGFRYHARDVAMYRAHLENCPIILGSASPSIDSYALVEMGKMTRLELNQRAGAAVMPKIHL
IDLKIAQKQNGMSQSLIDEIQKRLDKKEQVLVFLNRRGYAPVLICESCAWQAKCPHCDANFTVHRQPYQHLHCHHCGSIH
RLPEQCPQCKHSELKPIGLGTAKVEENLQQLFPHFDVIRVDRDSTSRVGSWQKIYDKIQKSEPVILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDFRATERTAQLIVQVAGRAGRGERKGEVYLQTLRPDHPLLNTLIDKDYRHFARQTLKERQAAAL
PPFRYAALIRCESKSQEQNQEFLQQHAQALRQVSENLIDIWGPIPAPMERKAGRYQAHMVLLSQDRARLHFYIRTWWQNM
LHEKPSNMKLTLDIDPQELS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=524462 JFY49_RS01855 WP_086195243.1 407776..409998(-) (priA) [Acinetobacter sp. CS-2]
ATGCCAAATACACCACCGACTCCAGCCGACATTTATCGCATTCGTGTTGCCGTACCTGTACATCTCTATGACTGTTTTGA
CTACACTTTAACGGCTGAACAATATCAGCAAGCTGAAGTTGGGGCACGTGTGGCCGTGTCGTTTGGACGGCAAAATCTGG
TGGGCATTATTGTTGAAAAATTAACGGCCGATACCCCGATTGATCCACATTTTAAGCTCAAAGCCATCACTGAACTGCTG
GATGAACAAGCGCTTTTAGATCAAAAAATTTTAAGCTTGCTCACCTGGTCCGCGCAATATTATCAATTTCCGATTGGTGA
AGTATTTCAGAGTGCCCTGCCGACATTTTTACGTCAGGGCAAACCCTATAATTTATTGGCCCGCATGTGGAAAGTTCTGG
ATTTGCATGCTGAAGACAAGCTGATGCGCTCTGAAAAACAGCAACAAGCCTATAAAGTGCTGAAATTACATCCTCAAGGC
ACCACAGAAAATATTTTAAATTTAGCCGGAATTGAAACGGCGACACTCAAGGCACTGGAAAAAAAGGCGATTGTGCAATG
CATTCTGGAACATCAGGACTTTAGTCCTCAACCGGTCACCCTGGCACAAATGCCCTTAACCGCAAATGAAGATCAGAAAA
AAGCCATTCAACAGGTGTTGAAAGCCCAGAAAAAATATCAGGCTTTTTTACTGGATGGCTTGACCGGGAGCGGTAAAACC
GAAGTGTATTTGCAAATCATGCAAGAGGTGCTGAAACAGGGTAAACAGGTCTTGGTTTTAGTGCCTGAAATTGGCCTGAC
CCCGCAGACCATCAGCCGGTTCCAGTCACGTTTTCATGGCAACATTGTACTACTGCATTCAGGACTGAACGATTCAAAGC
GCCTGCAAGCCTGGCAGGCTGCACAAACTGGCAAAGCTTCGATTATTTTAGGGACCCGTTCAACCATTTATACGCCGCTG
CCCAATCTGGGCCTGATCATTCTGGATGAGGAACACGACCTGTCTTTCAAACAGCAGGAAGGCTTTCGCTACCATGCCCG
TGATGTCGCAATGTACCGTGCCCATCTGGAAAATTGTCCGATTATTTTAGGCTCAGCCAGCCCAAGTATTGACAGCTATG
CACTGGTTGAAATGGGGAAAATGACCCGTTTAGAACTGAATCAGCGTGCCGGTGCAGCCGTGATGCCAAAAATTCATCTG
ATTGACCTGAAAATTGCACAAAAACAGAATGGCATGAGCCAAAGCCTGATTGATGAAATTCAAAAACGTCTGGATAAAAA
AGAACAGGTATTGGTGTTTTTAAACCGTCGCGGTTATGCCCCGGTACTGATTTGTGAAAGCTGTGCCTGGCAAGCCAAAT
GTCCGCATTGTGATGCCAACTTTACCGTGCATCGCCAGCCTTATCAGCATTTGCATTGTCACCACTGTGGCAGCATTCAC
CGTCTACCGGAACAATGCCCGCAGTGCAAGCATAGTGAATTAAAACCGATTGGCCTGGGCACCGCCAAAGTGGAAGAAAA
CCTGCAACAACTGTTCCCCCATTTCGATGTGATCCGGGTCGACCGCGATTCCACCAGCCGGGTCGGCAGCTGGCAAAAAA
TTTATGACAAAATCCAGAAAAGTGAACCGGTGATTTTGCTCGGCACCCAGATGCTGGCCAAAGGACATCATTTTCCCTAT
GTCACTTTAGTGGCTATTTTAGATATTGATTCCGGCCTGCTCAGTGTCGATTTCCGTGCCACCGAACGCACGGCACAACT
GATTGTACAGGTCGCTGGTCGTGCCGGACGCGGTGAACGCAAAGGTGAAGTCTATTTACAAACCCTGAGACCGGATCATC
CACTATTAAATACCTTAATTGACAAAGATTACCGGCATTTCGCCAGACAGACCTTAAAAGAACGTCAGGCCGCTGCTTTA
CCGCCTTTTCGTTATGCAGCCTTAATACGCTGTGAATCGAAAAGTCAGGAACAGAACCAGGAATTTTTACAGCAGCATGC
TCAGGCGTTAAGACAGGTTTCGGAAAACCTGATTGATATCTGGGGACCGATTCCTGCCCCGATGGAACGTAAGGCCGGGC
GTTATCAGGCGCATATGGTGCTGCTGTCACAAGATCGTGCCCGATTACATTTTTATATCCGTACCTGGTGGCAAAATATG
TTGCATGAAAAGCCCTCAAACATGAAACTGACACTCGATATAGATCCTCAGGAATTAAGCTAA

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(642-736)

Type III restriction enzyme, res subunit (ResIII)

(209-345)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A241VE60

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

72.237

100

0.724