Detailed information NTG0524355

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: K6T41_RS09875
• Genome accession: NZ_CP081924
• Coordinates: 2093767..2096532 (+)
• Length: 921 a.a.
• NCBI ID: WP_004917760.1
• Uniprot ID: E4TE29
• Organism: Riemerella anatipestifer strain 20190212E1-4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2088767..2101532

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6T41_RS09855 (K6T41_09855)	tsaE	2089717..2090124 (-)	408	WP_214202710.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	-
K6T41_RS09860 (K6T41_09860)	-	2090601..2091254 (+)	654	WP_004917751.1	hypothetical protein	-
K6T41_RS09865 (K6T41_09865)	-	2091376..2092209 (+)	834	WP_004917755.1	phosphatase PAP2 family protein	-
K6T41_RS09870 (K6T41_09870)	eptA	2092196..2093719 (+)	1524	WP_004917757.1	phosphoethanolamine--lipid A transferase EptA	-
K6T41_RS09875 (K6T41_09875)	uvrA	2093767..2096532 (+)	2766	WP_004917760.1	excinuclease ABC subunit UvrA	Machinery gene
K6T41_RS09880 (K6T41_09880)	-	2096591..2098768 (-)	2178	WP_004917761.1	TonB-dependent siderophore receptor	-
K6T41_RS09885 (K6T41_09885)	kdsA	2098795..2099604 (-)	810	WP_004917762.1	3-deoxy-8-phosphooctulonate synthase	-
K6T41_RS09890 (K6T41_09890)	-	2099753..2100313 (-)	561	WP_004917764.1	RsmD family RNA methyltransferase	-
K6T41_RS09895 (K6T41_09895)	-	2100339..2101055 (-)	717	WP_004917766.1	DUF3822 family protein	-

Sequence

Protein

• Length: 921 a.a.
• Molecular weight: 103381.49 Da
• Isoelectric Point: 6.1758

>NTDB_id=524355 K6T41_RS09875 WP_004917760.1 2093767..2096532(+) (uvrA) [Riemerella anatipestifer strain 20190212E1-4]
MNIKNNIFVKNAHLNNLKNIDVLIPKNKLVVVTGVSGSGKSSLAFDTIYAEGQRRYVESLSSYARQFLGRLEKPKIDDIK
GLAPSIAIQQKVISSNPRSTVGTSTEIYDYLKLLFARVGRTYSPVSGDEVKKDSISDVISYIEENPNQEFLLTAPLSFAD
GDFKSLLNTLKVSGFTRLEINGNIAEIEDLESFGFVPEKEMSLNLVIDRFVYEDDEYFLQRLADSIQTAFYEGHGSCALK
NIETQKIKHFSNLFEADGISFLEPNLHFFSFNNPYGACPTCEGYGKVVGIDEDLVIPNKRLSVYEDAVACWKGETMSEWK
MHFIKNAPDFPIHKPYFELTKEQKQLLWRGTGAKNFPCIDQFFRMLEENLYKIQYRVMLSRYRGKTKCPDCEGLRLRKET
EWVKVGGHNIQSLMELPLDELLPLIKNLKLTKHEQEIAKRLLYEITTRLEFLLKVGLGYLTLNRTSNTLSGGESQRINLA
TSLGSSLVGSIYILDEPSIGLHSQDTENLIEVLKNLRDLGNTVIVVEHDEDIMRAADYIIDIGPEAGFLGGELVFAGDFK
DLKEADTLTSKYLTGRLEIAVPKRRRRAKSFINIKGARQNNLKNIDVDIPLENLVVVTGVSGSGKSTLMKEVLANDIQIQ
LGMGGKKADYDYVEFPPQLVKHIELIDQNPIGKSSRSNPVTYLKAYDDIRDLFAKQRHSKTMNLKPKHFSFNVDGGRCDE
CKGEGIITISMQFMADVELECEHCKGARFKSEILEVKFDEKNIADILQMTVDEAIDFFSDNKQDKIVTKLKPLQEVGLGY
LKLGQSSSTLSGGEAQRVKLASFLVKGVTTEKTLFIFDEPSTGLHFHDIQKLLTSLQALIELGHSVVVIEHQPDIIKSAD
WIIDIGPNAGKYGGEVVFAGTPEDLAKDKKSKTAKFVAEKL

Nucleotide

• Length: 2766 bp

>NTDB_id=524355 K6T41_RS09875 WP_004917760.1 2093767..2096532(+) (uvrA) [Riemerella anatipestifer strain 20190212E1-4]
ATGAATATTAAAAATAATATTTTTGTTAAAAACGCACATCTTAACAACCTTAAAAATATAGATGTTCTCATACCTAAAAA
CAAACTAGTGGTAGTAACTGGCGTGTCTGGTAGTGGGAAATCGTCTTTAGCCTTTGATACTATTTATGCCGAAGGGCAGA
GGCGTTATGTGGAGAGTTTAAGCTCTTATGCTAGGCAGTTTTTGGGACGATTGGAAAAGCCAAAGATAGACGATATTAAA
GGTTTAGCACCATCTATCGCCATACAACAGAAAGTAATTTCTTCTAATCCAAGGTCCACAGTAGGAACTTCCACCGAAAT
TTACGATTATCTTAAATTATTGTTTGCTCGTGTGGGGCGTACCTATTCACCTGTGTCTGGTGATGAGGTGAAAAAGGACA
GCATTTCTGATGTCATTTCTTATATAGAAGAAAATCCTAATCAAGAGTTTCTACTCACAGCACCGCTTTCTTTTGCTGAT
GGTGATTTTAAATCATTGTTAAATACATTGAAAGTTTCAGGATTTACTAGATTGGAAATTAACGGAAATATCGCTGAAAT
AGAAGATTTAGAGAGTTTCGGCTTCGTTCCTGAAAAAGAGATGTCGCTTAATTTGGTTATTGACCGCTTTGTTTACGAGG
ACGATGAGTATTTTCTGCAACGCTTAGCAGATTCTATCCAAACAGCTTTTTACGAAGGGCACGGCTCTTGTGCTTTAAAA
AATATTGAAACACAAAAAATAAAACATTTTTCTAACCTTTTTGAAGCTGATGGTATTTCTTTTTTAGAACCAAATCTTCA
TTTTTTCAGTTTTAATAATCCTTACGGAGCGTGTCCTACTTGTGAGGGTTATGGTAAAGTGGTTGGGATAGATGAAGACT
TAGTAATTCCTAATAAAAGGCTTTCGGTTTACGAAGATGCCGTCGCTTGTTGGAAAGGAGAAACGATGAGCGAGTGGAAA
ATGCATTTTATCAAAAACGCTCCAGATTTTCCAATCCATAAACCCTATTTTGAACTTACTAAAGAGCAAAAACAACTCTT
ATGGAGAGGAACAGGAGCTAAAAATTTCCCTTGTATAGACCAGTTTTTCCGTATGCTGGAGGAGAATTTGTATAAGATAC
AATACCGAGTGATGCTTTCTCGTTACAGGGGTAAAACCAAATGTCCCGACTGCGAAGGTCTAAGATTAAGAAAAGAAACC
GAATGGGTAAAAGTGGGAGGGCATAACATACAATCGTTAATGGAATTACCATTAGACGAACTTCTGCCTTTAATTAAGAA
TCTTAAACTTACCAAACACGAGCAAGAAATTGCTAAAAGGCTACTCTACGAAATTACTACTAGACTAGAGTTTTTGTTAA
AAGTAGGCTTGGGATATTTAACGTTGAACCGTACTTCTAATACTTTGTCAGGTGGAGAAAGTCAAAGGATTAACTTAGCG
ACTAGCTTGGGGAGTTCTTTGGTTGGGTCTATTTATATTTTGGACGAGCCTTCCATTGGGCTACATTCACAGGATACCGA
GAATTTAATAGAAGTTCTAAAGAATTTAAGAGATTTAGGTAATACCGTTATTGTTGTGGAACACGATGAGGATATTATGC
GTGCCGCAGATTATATTATAGATATAGGTCCAGAAGCCGGTTTCCTTGGGGGAGAGCTGGTCTTCGCAGGCGATTTTAAA
GACCTCAAAGAAGCCGATACTTTAACTTCTAAATACCTTACAGGAAGGCTAGAAATAGCAGTGCCAAAAAGGAGAAGGAG
AGCTAAATCGTTCATCAATATCAAAGGAGCAAGACAAAATAACCTTAAAAATATAGATGTTGATATTCCTTTGGAGAATT
TGGTGGTGGTTACGGGAGTGTCGGGCTCTGGTAAATCTACATTGATGAAAGAGGTTTTGGCTAACGATATTCAAATCCAG
TTAGGAATGGGAGGCAAAAAAGCCGACTACGATTATGTGGAATTTCCGCCTCAACTTGTGAAGCATATAGAGCTGATAGA
TCAAAATCCTATCGGAAAATCGTCTAGGTCTAATCCTGTAACCTATCTTAAGGCTTATGATGATATTAGAGATTTGTTCG
CTAAGCAGCGTCATTCTAAAACTATGAATTTGAAGCCTAAGCACTTTTCGTTTAATGTAGATGGTGGGAGATGTGATGAG
TGTAAAGGTGAGGGTATTATTACCATATCTATGCAGTTTATGGCAGATGTGGAACTAGAGTGTGAGCACTGTAAAGGTGC
AAGATTTAAGTCCGAAATATTGGAAGTTAAATTTGATGAGAAAAACATTGCAGATATTCTACAAATGACGGTAGATGAAG
CGATTGATTTCTTTAGTGATAATAAACAAGATAAAATAGTTACGAAACTAAAACCATTGCAAGAGGTAGGTTTAGGCTAT
CTTAAACTAGGGCAAAGTTCTTCTACGCTTTCGGGTGGGGAAGCTCAAAGGGTAAAGTTGGCTTCATTTTTAGTGAAGGG
CGTAACTACGGAGAAAACGCTTTTCATCTTTGATGAACCTTCCACAGGGCTTCATTTTCACGATATACAGAAATTATTAA
CCTCATTACAGGCACTTATAGAGCTGGGGCATTCTGTAGTAGTTATAGAGCATCAGCCAGATATTATTAAGTCAGCAGAT
TGGATCATAGATATAGGTCCTAACGCAGGTAAGTATGGTGGAGAAGTGGTTTTTGCTGGAACACCTGAGGATTTAGCAAA
AGATAAAAAATCCAAAACTGCTAAATTCGTAGCCGAAAAACTTTAA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (602-841)

• UvrA interaction domain (UvrA_inter) (135-240)

• UvrA DNA-binding domain (UvrA_DNA-bind) (291-356)

3D structure

• AlphaFold DB: E4TE29

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	44.271	100	0.461
uvrA	Streptococcus pneumoniae TIGR4	44.271	100	0.461
uvrA	Streptococcus pneumoniae D39	44.271	100	0.461