Detailed information    

insolico Bioinformatically predicted

Overview

Name   sepM   Type   Regulator
Locus tag   JHX98_RS06330 Genome accession   NZ_CP067010
Coordinates   1225120..1226157 (-) Length   345 a.a.
NCBI ID   WP_010922499.1    Uniprot ID   A0A4U9I5V9
Organism   Streptococcus pyogenes strain iGAS376     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1220120..1231157
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JHX98_RS06310 (JHX98_06310) - 1220872..1221498 (+) 627 WP_011888733.1 A24 family peptidase -
  JHX98_RS06315 (JHX98_06315) rlmN 1221580..1222659 (-) 1080 WP_011184761.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  JHX98_RS06320 (JHX98_06320) - 1222663..1223283 (-) 621 WP_002992791.1 YutD family protein -
  JHX98_RS06325 (JHX98_06325) - 1223731..1224708 (-) 978 WP_002989070.1 LacI family DNA-binding transcriptional regulator -
  JHX98_RS06330 (JHX98_06330) sepM 1225120..1226157 (-) 1038 WP_010922499.1 SepM family pheromone-processing serine protease Regulator
  JHX98_RS06335 (JHX98_06335) coaD 1226144..1226635 (-) 492 WP_002983821.1 pantetheine-phosphate adenylyltransferase -
  JHX98_RS06340 (JHX98_06340) rsmD 1226625..1227164 (-) 540 WP_011888732.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  JHX98_RS06345 (JHX98_06345) asnA 1227287..1228279 (-) 993 WP_011888731.1 aspartate--ammonia ligase -
  JHX98_RS06350 (JHX98_06350) arcC 1228592..1229542 (-) 951 WP_011528820.1 carbamate kinase -
  JHX98_RS06355 (JHX98_06355) - 1229562..1230893 (-) 1332 WP_011888730.1 dipeptidase -

Sequence

Protein


Download         Length: 345 a.a.        Molecular weight: 37541.24 Da        Isoelectric Point: 9.6692

>NTDB_id=524348 JHX98_RS06330 WP_010922499.1 1225120..1226157(-) (sepM) [Streptococcus pyogenes strain iGAS376]
MKRLKKIKWWLVGLLALISLLLALFFPLPYYIEMPGGAYDIRTVLQVNGKEDKRKGAYQFVAVGISRASLAQLLYAWLTP
FTEISTAEDTTGGYSDADFLRINQFYMETSQNAAIYQALSLAGKPVTLDYKGVYVLDVNNESTFKGTLHLADTVTGVNGK
QFTSSAELIDYVSHLKLGDEVTVQFTSDNKPKKGVGRIIKLKNGKNGIGIALTDHTSVNSEDTVIFSTKGVGGPSAGLMF
TLDIYDQITKEDLRKGRTIAGTGTIGKDGEVGDIGGAGLKVVAAAEAGADIFFVPNNPVDKEIKKVNPNAISNYEEAKRA
AKRLKTKMKIVPVTTVQEALVYLRK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=524348 JHX98_RS06330 WP_010922499.1 1225120..1226157(-) (sepM) [Streptococcus pyogenes strain iGAS376]
ATGAAAAGACTTAAAAAAATCAAATGGTGGTTAGTGGGTCTGCTAGCTTTAATCTCTTTGTTGCTAGCGTTATTTTTTCC
GCTACCTTATTATATTGAAATGCCTGGAGGCGCTTACGATATTCGGACTGTCTTACAAGTCAATGGCAAAGAAGACAAAC
GAAAAGGAGCTTACCAGTTTGTTGCAGTGGGCATTAGTCGTGCCAGCCTCGCGCAGCTATTATATGCTTGGCTGACACCG
TTTACTGAAATTAGTACAGCAGAAGATACAACAGGCGGATACAGCGATGCTGATTTCCTTCGAATTAATCAATTTTACAT
GGAAACATCACAAAATGCAGCTATTTATCAAGCTTTATCCTTAGCTGGAAAACCAGTTACATTAGATTATAAAGGCGTAT
ATGTTTTAGACGTAAACAACGAATCTACTTTTAAAGGAACGTTACACTTAGCAGATACTGTAACAGGTGTAAATGGTAAA
CAGTTTACTAGTTCAGCAGAACTTATTGACTATGTTTCTCACCTAAAACTAGGGGATGAAGTTACGGTTCAGTTTACGAG
TGATAATAAGCCTAAAAAAGGAGTTGGCCGTATTATCAAACTGAAAAATGGGAAAAATGGGATTGGCATTGCCTTGACTG
ATCATACAAGTGTCAATTCAGAAGACACAGTGATCTTTAGTACTAAAGGAGTAGGAGGACCTAGTGCTGGTCTAATGTTT
ACTCTTGATATATATGATCAAATAACTAAAGAAGATTTACGCAAGGGCCGTACAATTGCAGGTACAGGAACTATTGGCAA
GGATGGCGAAGTAGGAGATATTGGTGGTGCAGGTCTTAAAGTAGTTGCAGCAGCTGAAGCTGGTGCAGATATATTTTTTG
TTCCGAATAATCCTGTTGATAAGGAAATTAAAAAAGTTAATCCAAATGCTATAAGTAATTACGAAGAAGCCAAACGGGCA
GCCAAACGACTAAAGACCAAAATGAAGATTGTTCCTGTTACGACTGTTCAAGAGGCACTGGTTTATCTTCGCAAATAA

Domains

Predicted by InterproScan.

Lon protease (S16) C-terminal proteolytic domain (Lon_C)

(233-309)

PDZ domain (PDZ_2)

(129-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U9I5V9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.275

100

0.693