Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   JHX98_RS02510 Genome accession   NZ_CP067010
Coordinates   462903..463712 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain iGAS376     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 457903..468712
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JHX98_RS02490 (JHX98_02490) - 458345..459592 (+) 1248 WP_011284594.1 AMP-binding protein -
  JHX98_RS02495 (JHX98_02495) - 459648..460682 (+) 1035 WP_011184290.1 DUF3114 domain-containing protein -
  JHX98_RS02500 (JHX98_02500) vicR 460844..461554 (+) 711 WP_002985645.1 response regulator YycF Regulator
  JHX98_RS02505 (JHX98_02505) vicK 461547..462899 (+) 1353 WP_002990673.1 cell wall metabolism sensor histidine kinase VicK Regulator
  JHX98_RS02510 (JHX98_02510) vicX 462903..463712 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  JHX98_RS02515 (JHX98_02515) rnc 464155..464847 (+) 693 WP_002985639.1 ribonuclease III -
  JHX98_RS02520 (JHX98_02520) smc 464848..468387 (+) 3540 WP_011889080.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=524336 JHX98_RS02510 WP_002985641.1 462903..463712(+) (vicX) [Streptococcus pyogenes strain iGAS376]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=524336 JHX98_RS02510 WP_002985641.1 462903..463712(+) (vicX) [Streptococcus pyogenes strain iGAS376]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTTAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCACATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758