Detailed information NTG0524311

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: K6T41_RS01250
• Genome accession: NZ_CP081924
• Coordinates: 268878..271703 (-)
• Length: 941 a.a.
• NCBI ID: WP_014411215.1
• Uniprot ID: H8MDC1
• Organism: Riemerella anatipestifer strain 20190212E1-4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 263878..276703

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6T41_RS01235 (K6T41_01235)	-	266103..266636 (+)	534	WP_004918921.1	hypothetical protein	-
K6T41_RS01240 (K6T41_01240)	purH	266736..268250 (-)	1515	WP_004918920.1	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	-
K6T41_RS01245 (K6T41_01245)	-	268270..268854 (-)	585	WP_004918918.1	outer membrane beta-barrel protein	-
K6T41_RS01250 (K6T41_01250)	uvrA	268878..271703 (-)	2826	WP_014411215.1	excinuclease ABC subunit UvrA	Machinery gene
K6T41_RS01255 (K6T41_01255)	-	271827..272771 (-)	945	WP_004918915.1	SPFH domain-containing protein	-
K6T41_RS01260 (K6T41_01260)	rpsA	273102..274883 (+)	1782	WP_004918909.1	30S ribosomal protein S1	-
K6T41_RS01265 (K6T41_01265)	-	275101..276297 (-)	1197	WP_214202684.1	aminopeptidase C	-

Sequence

Protein

• Length: 941 a.a.
• Molecular weight: 105469.16 Da
• Isoelectric Point: 7.3407

>NTDB_id=524311 K6T41_RS01250 WP_014411215.1 268878..271703(-) (uvrA) [Riemerella anatipestifer strain 20190212E1-4]
MMKNRDFIEVYGAREHNLKNIDVKIPRNELVVITGLSGSGKSSLAFDTIFAEGQRRYIETFSAYARQFLGGLERPDVDKI
EGLSPVIAIEQKTTNKNPRSTVGTVTELYDFLRLLFARVSTAYSLETGKKLQSYTEEQILETIKEQYQNEKVLLLAPLVK
ARKGHYHELFVQLAKKGYSQARIDGTLQDIEYDLKLDRYKTHDIEVVIDRWIIGETASEARMQKSLSTALQMGGGVVMVQ
KYNSEEFQYFSKDLMDTATGQALPLPEPNTFSFNSPKGSCPHCKGLGTVKKINPDYLVTEPTLPFQSALLPLETYKFSKW
ALSQIKSILELFDLNLQTPFNKIPKEALDYIYYGCDKEFVKDLKHAGISKKTKINFEGLIPHLEKVIEDKENYGATQVER
EFTVEEICTDCNGTRLKPESLAFKIEGKNIAEVNAMSLLDLKDWLSEIKNSFSEKNKIIAHEILKEIETRLGFLLDVGLE
YLSLSRSSKTLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNERLINSLKSLRDLGNSVLVVEHDKDMILEADE
VLDIGPKAGKYGGKVLWQGSPKDLIKADTITADYLTGRRKIEIPEKRREGNGNEIVLKGATGNNLKNVTLKIPLGKMVVV
TGISGSGKSSLINGTLYPILNRHFYRAVQEPLPYEKIEGIEHIDKIVDVDQTPIGRTPRSNPATYTGVFSDIRTLFANLP
ESKIRGYKAGRFSFNVKGGRCETCQGGGLKVIEMNFLPDVYVHCETCNGKRFNRETLEVRYKGKSISDVLDMTIDEAVEF
FQPIPKIYSKVKTLQEVGLGYITLGQQSTTLSGGEAQRVKLATELSKKQTGKTLYILDEPTTGLHFEDVKILMEVIQKLV
DLGNSFIIIEHNMDVIKLADHIIDVGPEGGKNGGSIVAEGTPEEIIKNKKSITGKFLKKEM

Nucleotide

• Length: 2826 bp

>NTDB_id=524311 K6T41_RS01250 WP_014411215.1 268878..271703(-) (uvrA) [Riemerella anatipestifer strain 20190212E1-4]
ATGATGAAAAATAGAGATTTCATAGAGGTCTATGGTGCTAGAGAGCATAACTTAAAAAACATTGATGTTAAAATTCCTCG
TAACGAGTTAGTCGTTATTACAGGGCTATCAGGAAGTGGGAAATCTTCTTTAGCATTTGATACTATTTTTGCAGAAGGAC
AAAGGCGTTATATAGAAACATTTTCCGCCTATGCTCGGCAGTTTCTAGGTGGATTAGAACGCCCCGATGTTGATAAAATA
GAAGGACTTTCCCCTGTTATCGCTATTGAACAAAAAACCACTAATAAAAACCCTCGTTCTACCGTAGGGACGGTTACAGA
ACTTTATGATTTTCTCAGACTTCTATTTGCTAGAGTTTCCACAGCTTATTCCTTAGAAACAGGTAAAAAGCTACAAAGCT
ATACCGAAGAGCAAATTTTAGAAACCATCAAAGAACAATATCAGAATGAAAAAGTCTTGCTTCTAGCACCGCTAGTAAAG
GCTAGAAAGGGGCATTATCACGAGCTTTTTGTGCAATTAGCCAAAAAAGGATATTCCCAAGCAAGAATAGATGGCACTTT
GCAAGATATAGAATACGACCTTAAACTAGACCGATACAAAACCCACGATATAGAAGTAGTTATAGACCGTTGGATTATAG
GCGAAACCGCATCTGAAGCTAGGATGCAAAAATCACTTTCCACAGCTTTGCAGATGGGGGGTGGTGTGGTTATGGTTCAA
AAATATAATTCGGAAGAGTTTCAGTATTTTTCTAAAGATTTAATGGATACCGCCACAGGACAGGCTCTACCATTACCAGA
ACCAAATACTTTTTCGTTCAATTCTCCTAAAGGGAGTTGTCCTCATTGTAAAGGTTTGGGAACTGTAAAAAAAATCAATC
CTGATTATCTAGTTACCGAGCCTACTCTACCCTTTCAGTCGGCACTATTACCATTAGAAACTTATAAATTTAGTAAATGG
GCTTTATCTCAAATTAAAAGCATTCTAGAATTATTTGACCTTAACCTACAAACACCATTCAACAAAATTCCTAAAGAAGC
CTTAGACTACATCTATTACGGTTGTGATAAAGAGTTTGTAAAAGATTTAAAACACGCTGGAATTTCCAAAAAAACTAAAA
TTAACTTTGAAGGGCTAATCCCTCATTTAGAAAAAGTTATAGAAGATAAAGAGAACTACGGTGCTACACAAGTGGAACGA
GAGTTTACAGTAGAAGAAATCTGTACGGACTGTAACGGAACAAGATTAAAACCCGAAAGTTTAGCCTTTAAAATAGAAGG
TAAGAATATAGCTGAAGTTAATGCGATGAGCTTATTAGACTTAAAAGATTGGCTTTCGGAAATAAAAAATAGCTTTAGCG
AAAAAAACAAAATTATCGCCCACGAAATTTTAAAAGAGATAGAAACTCGTTTGGGCTTTTTATTAGACGTAGGGCTAGAA
TATCTTAGTCTTAGTAGAAGTAGTAAAACCCTTTCTGGAGGCGAATCCCAAAGGATTCGTTTGGCAACTCAGATAGGTTC
GCAGTTGGTGAATGTCCTTTATATTTTAGACGAACCTTCTATTGGGCTTCACCAGAGAGATAACGAAAGACTTATCAACT
CTTTAAAAAGTTTACGAGATTTAGGAAACTCTGTTCTTGTGGTGGAACACGATAAGGATATGATTTTGGAAGCCGATGAA
GTGCTAGACATCGGACCTAAAGCAGGTAAATATGGCGGAAAAGTCTTGTGGCAAGGCAGCCCAAAAGATTTAATAAAAGC
TGATACCATTACAGCAGATTACCTCACAGGAAGAAGAAAAATAGAAATTCCCGAAAAGAGAAGAGAAGGCAATGGTAATG
AGATTGTCCTCAAAGGAGCTACGGGCAATAATCTTAAAAATGTAACTCTAAAAATTCCTTTAGGGAAGATGGTTGTAGTT
ACGGGGATTTCGGGAAGTGGAAAATCCTCGCTAATCAACGGAACTCTCTACCCTATTCTTAACCGACATTTCTACCGTGC
TGTGCAAGAGCCTCTACCTTACGAAAAGATAGAAGGTATAGAGCATATAGACAAAATAGTAGATGTAGACCAAACGCCCA
TCGGTAGAACGCCTCGTTCTAACCCTGCTACTTACACAGGTGTATTTTCGGATATCCGAACCTTGTTCGCTAACCTTCCA
GAAAGTAAAATCAGAGGTTATAAGGCAGGGAGGTTTTCGTTTAATGTTAAAGGTGGACGCTGCGAAACTTGTCAAGGAGG
TGGTTTGAAAGTGATTGAAATGAATTTCTTGCCTGATGTCTATGTACATTGCGAAACCTGCAACGGCAAACGCTTTAATA
GAGAGACCTTGGAGGTAAGATATAAAGGTAAATCTATATCCGATGTCCTAGATATGACTATAGACGAAGCTGTGGAATTT
TTTCAGCCAATCCCCAAAATCTATTCTAAGGTGAAAACGCTACAAGAAGTTGGTTTAGGTTATATTACCTTAGGACAACA
GTCTACTACACTTTCAGGCGGAGAGGCTCAAAGGGTAAAATTGGCTACAGAACTTTCTAAGAAACAAACAGGTAAAACAC
TTTATATCTTAGATGAACCTACCACAGGACTGCATTTTGAAGATGTTAAGATTCTGATGGAGGTTATCCAAAAGCTAGTA
GATTTGGGTAACTCTTTTATCATTATTGAACATAATATGGACGTGATAAAACTTGCCGACCATATTATAGATGTAGGTCC
AGAAGGTGGTAAAAATGGAGGAAGCATTGTGGCAGAAGGTACTCCAGAAGAAATTATAAAGAATAAAAAATCTATCACAG
GTAAATTTTTGAAAAAAGAAATGTAG

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (294-391)

• UvrA interaction domain (UvrA_inter) (135-241)

3D structure

• AlphaFold DB: H8MDC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	51.695	100	0.519
uvrA	Streptococcus pneumoniae TIGR4	51.695	100	0.519
uvrA	Streptococcus pneumoniae D39	51.695	100	0.519