Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   BTG_RS14420 Genome accession   NC_018500
Coordinates   2902048..2902224 (-) Length   58 a.a.
NCBI ID   WP_001003335.1    Uniprot ID   A0A9W5VN58
Organism   Bacillus thuringiensis HD-771     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2897048..2907224
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BTG_RS14400 (BTG_14870) - 2897828..2898574 (-) 747 WP_000966119.1 YjbA family protein -
  BTG_RS14405 (BTG_14875) - 2898718..2899506 (-) 789 WP_000538198.1 DUF2268 domain-containing protein -
  BTG_RS14410 (BTG_14880) fabF 2899614..2900852 (-) 1239 WP_000412645.1 beta-ketoacyl-ACP synthase II -
  BTG_RS14415 (BTG_14885) fabH 2900884..2901816 (-) 933 WP_001100533.1 beta-ketoacyl-ACP synthase III -
  BTG_RS14420 (BTG_14890) comZ 2902048..2902224 (-) 177 WP_001003335.1 ComZ family protein Regulator
  BTG_RS14425 (BTG_14895) - 2902279..2903151 (-) 873 WP_000486170.1 NAD-dependent epimerase/dehydratase family protein -
  BTG_RS14430 (BTG_14900) - 2903181..2903915 (-) 735 WP_000028706.1 hypothetical protein -
  BTG_RS14435 (BTG_14905) - 2904072..2904254 (+) 183 WP_001211116.1 YjzD family protein -
  BTG_RS14440 (BTG_14910) clpB 2904293..2906893 (-) 2601 WP_000365376.1 ATP-dependent chaperone ClpB -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6575.71 Da        Isoelectric Point: 4.4184

>NTDB_id=52429 BTG_RS14420 WP_001003335.1 2902048..2902224(-) (comZ) [Bacillus thuringiensis HD-771]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQQ

Nucleotide


Download         Length: 177 bp        

>NTDB_id=52429 BTG_RS14420 WP_001003335.1 2902048..2902224(-) (comZ) [Bacillus thuringiensis HD-771]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCGCTTGATATGGAGAAAGCACAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAACAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment