Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   JHX97_RS02510 Genome accession   NZ_CP067009
Coordinates   462902..463711 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain iGAS391     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 457902..468711
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JHX97_RS02490 (JHX97_02490) - 458344..459591 (+) 1248 WP_011284594.1 AMP-binding protein -
  JHX97_RS02495 (JHX97_02495) - 459647..460681 (+) 1035 WP_011184290.1 DUF3114 domain-containing protein -
  JHX97_RS02500 (JHX97_02500) vicR 460843..461553 (+) 711 WP_002985645.1 response regulator YycF Regulator
  JHX97_RS02505 (JHX97_02505) vicK 461546..462898 (+) 1353 WP_002990673.1 cell wall metabolism sensor histidine kinase VicK Regulator
  JHX97_RS02510 (JHX97_02510) vicX 462902..463711 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  JHX97_RS02515 (JHX97_02515) rnc 464154..464846 (+) 693 WP_002985639.1 ribonuclease III -
  JHX97_RS02520 (JHX97_02520) smc 464847..468386 (+) 3540 WP_011889080.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=524280 JHX97_RS02510 WP_002985641.1 462902..463711(+) (vicX) [Streptococcus pyogenes strain iGAS391]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=524280 JHX97_RS02510 WP_002985641.1 462902..463711(+) (vicX) [Streptococcus pyogenes strain iGAS391]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTTAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCACATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758